Raphanus sativus (radish): 130501278
Help
Entry
130501278 CDS
T06014
Name
(RefSeq) ent-copalyl diphosphate synthase, chloroplastic-like isoform X1
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00904
Diterpenoid biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
130501278
Enzymes [BR:
rsz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
130501278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth
Terpene_synth_C
SQHop_cyclase_C
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
130501278
NCBI-ProteinID:
XP_056852150
UniProt:
A0A9W3CKR4
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MSFQYCALNSVQNNNFFSTKTTISPYFLKIARSPFTVARSKPRGSSISCSKLPIQEYNNS
QEIQNDLPLIQWQHLQREDASQIGIGSNNIAIEEAVKRVKSILRNISDGEITISAYDTAW
VALIDAGDKTPAFPSAVKWIADNQLPDGSWGDAHLFNYHDRLINTLACIVALRSWNLCPH
QCNKGITFIQENIEKLEEEDDEHMPIGFEVAFPSLLEIARGINIDVPYDTPVLKDIYAKK
ELKLTRIPKEVMHKIPTTLLHSLEGMRDLDWEKLLKLQCQNGSFLFSPSSTAFAFMQTRD
NNCLKYLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYW
TDKGICWARCSHVQDIDDTAMAFRLLRLHGYQVSADVFKNFEKEGEFFCFAGQSNQALTG
IFNLYRASQLAFPKEEILKNAKEFSSKYLKRKQDKDELIDKWIIMKDLPGEIGFALDIPW
YASLPRVETRFYIEQYGGENDVWIGKTLYRMPYVNNNEYLELAKQDYNNCQALHQLEWET
FQKWYEENRLNECGVSRNELLECFYLAAATIFESERSDERMAWAKTSVLVKAISSFFGES
SDSRVSLFDHFHNARRSDQHFNDWDMILDRPGSVQAGRLVGILIGTLNQMSFDLFMSDGR
DVKNLIYQLWEDWLEKWKLHGEEGEGELIVKMIILMKNNGLASFFSHPHFVRLSEIINQI
NHIAQYSKARRNDEKEKTIKIMKNEMEQMVELVLSEIDTFRDVNITFLDVAKAFYYSASC
GDHLQTHIAKVLFQKVL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcaatactgtgctcttaactctgttcaaaataacaactttttcagtactaaa
acaacaatatctccttatttccttaagatcgcaagatcccctttcactgtggcgagaagc
aaacccagaggcagctccatatcttgttcaaagcttccaattcaagaatacaataattct
caggaaattcaaaatgatttacctcttatccagtggcaacatcttcaaagagaagatgct
tctcagattggcattggaagtaataatattgcaatcgaagaagcagtgaagagggtgaaa
tcgatattgagaaacataagtgacggtgaaattacaatatcagcatacgacacagcttgg
gttgcattgattgacgccggagataaaactccggcatttccatccgccgtgaaatggatc
gctgataatcaactccccgatggatcttggggtgatgcacatctcttcaattatcatgat
cgtctcatcaacacacttgcatgcatcgttgctctaagatcatggaatctctgtcctcac
caatgcaacaaaggaatcacgtttatccaagaaaatattgaaaagctagaagaagaagac
gatgagcatatgccaattggattcgaagtagcatttccttcattacttgaaatagcgcga
ggaataaacatagatgtaccgtatgatactccggtcttgaaagatatatacgccaagaaa
gagctaaagttaacaaggataccaaaagaggtaatgcacaagataccaacaacattgctg
catagtttggaaggcatgcgtgatttggattgggaaaagcttttgaaacttcaatgtcaa
aacggatcattcctcttctctccttcctctaccgctttcgcattcatgcagacccgagac
aataactgtctcaagtatttgcgcaatgccgtaaaacgtttcaatggaggagttcccaac
gtttttcctgtggatcttttcgaacacatatggatcgtggataggctacaacggctagga
atatcgagatactttgaagaagagattaaagagtgtcttgactatgtacacagatattgg
actgacaaaggcatctgttgggctagatgttcccatgtccaagacatcgacgacacagcc
atggcatttaggctattaagacttcatggataccaagtttcagcggatgtattcaagaac
tttgagaaagaaggagagtttttctgctttgcggggcaatcaaaccaagcgttgactggt
attttcaatctataccgggcatcgcaattggcgtttccaaaggaagagatattgaaaaat
gccaaagaattctcttccaagtatctgaaacgtaaacaagacaaagacgagttgattgat
aaatggattataatgaaagacttacctggcgagattgggtttgcgttagacattccatgg
tacgcaagcttgcctcgagtggagacgagattctatattgagcaatatggtggagaaaat
gacgtctggattggcaagaccctttataggatgccttatgtgaataataatgaatatctg
gaattagcgaaacaagactacaacaattgccaagctctgcatcaactcgaatgggaaacc
ttccaaaagtggtatgaagaaaataggttaaatgagtgtggtgtgagcagaaacgagctt
ctcgagtgcttttacctagcggctgcgactatctttgaatcagagaggtcagatgagaga
atggcgtgggccaaaacaagtgtattggtgaaagccatttcttctttttttggggaatcc
tctgattcaagagtaagcttattcgatcattttcacaatgctcgacgaagtgatcaacat
ttcaatgactgggacatgatattggaccgaccaggatcggttcaggcgggtcggcttgtc
ggaatcttaatcggaactttgaatcaaatgtccttcgacctcttcatgtctgatgggcgt
gacgttaaaaatctcatctatcagttgtgggaagattggctggagaaatggaaattacat
ggagaagaaggagaaggagagctcattgtgaagatgataattctaatgaagaacaatggt
ttagctagcttcttttctcatccgcactttgttcgtctctcagagatcatcaatcagatc
aatcatattgcccaatattcaaaggcaaggagaaacgatgagaaggagaagacaataaaa
ataatgaagaatgagatggagcaaatggttgagttagtgttgtcagagattgacacattc
cgtgatgtcaacatcacctttctcgatgtagcaaaggctttttactattctgcttcatgc
ggtgatcatctacaaactcacatcgcaaaagttttatttcaaaaagtcctatag
DBGET
integrated database retrieval system
