KEGG   Raphanus sativus (radish): 130504332
Entry
130504332         CDS       T06014                                 
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00040  Pentose and glucuronate interconversions
rsz01100  Metabolic pathways
Module
rsz_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    130504332
Enzymes [BR:rsz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     130504332
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 130504332
NCBI-ProteinID: XP_056854928
UniProt: A0A9W3CU04
LinkDB
Position
Unknown
AA seq 421 aa
MASARIFVAKAYSTNVGSLILMALVLGSCVANGEYLGGRRGLAAVAGNPTVFDITKNGAV
GTGATDSSKAFLNTWIQVCASPVPATLLVPKGEFLAGPVIFAGPCKSKVTVEVQGTITAP
PSGYPTPEWFLFEHVDNVVLTGPGTFHGKGEAVWKADGCGQKAVCNLPPTSLKFRNILNL
DISGISSVNAKAFHMFLVKTKNVNVQNIKLIAPAESPNTDGIHLSNAVNVYISDSLVATG
DDCISVGRGSTNVTVERVTCGPGHGLSVGSLGKYPNEENVADIHFRNCTMKDTDNGLRIK
SWGGSSPSTAVDITYEDIIMTNVKNPIIIDQNYGTRGGDSKVAISNVLFKNVRGTTISKD
EVQIMCSKAVPCKGVSVVDVELNFVGDKGGHPSSSGGLVGALCTNANVIFGGKLSFPMCP
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctagcgcaagaatttttgttgccaaggcatatagtactaatgtaggctcattaatc
ttaatggccttggtgttaggttcttgcgtagcgaatggtgaatatctaggtggccgccgt
ggccttgccgctgttgccggcaaccctacggtcttcgatattactaagaatggagcagtg
ggaactggtgccaccgattcttccaaggcgtttctaaacacatggatccaagtgtgtgcc
agtcctgtaccggcaacgctactagttcctaaaggagagttcctggctggtccagtaatt
tttgctggtccatgcaagagcaaagtgaccgtcgaagttcaaggcacaatcaccgctcca
ccaagcggatacccgactcctgaatggttcttattcgaacatgtcgataatgtcgtcctc
accggacccggcacattccacggcaaaggtgaagccgtttggaaagcagatggctgtggt
caaaaggccgtatgcaatcttcctccaacgtctctaaaattcagaaacatcttaaatctt
gacatttccggcattagctcggtcaacgcaaaggccttccacatgttcttggtaaaaact
aaaaatgtcaacgtccaaaacatcaagcttattgcccctgctgaaagtcccaacaccgat
ggtatccatttgagcaatgcggtcaatgtttacatctctgacagtttagtagcgacagga
gacgattgtatctcagtcggtcgtggttccaccaatgtaaccgtcgaacgcgtgacttgt
ggcccaggacacggcctaagtgtcggtagtcttggtaagtacccgaacgaggagaatgtt
gccgatattcactttaggaactgcaccatgaaagataccgacaatggtcttagaatcaag
agttggggtggttcgtctccaagcacagctgtggacatcacctatgaagatattattatg
acaaacgtcaagaacccaatcatcattgaccaaaactacggcacaagaggcggagattca
aaagttgcgataagcaatgtgctgttcaagaacgtaagaggaacaacaatttcaaaagat
gaagttcagatcatgtgcagcaaagcagtaccgtgcaaaggagtcagcgtcgttgatgtg
gagttgaacttcgtaggtgacaaaggaggacatccctcgtcgtcaggaggtttggtcgga
gctctttgtaccaacgccaatgttatcttcggtggaaaacttagcttccctatgtgtccc
aaataa

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