Raphanus sativus (radish): 130508058
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Entry
130508058 CDS
T06014
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
130508058
Enzymes [BR:
rsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
130508058
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130508058
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
130508058
NCBI-ProteinID:
XP_056859227
UniProt:
A0A9W3D648
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Position
2:34399845..34403786
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AA seq
627 aa
AA seq
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MPALTRNKKKGAKLQTETPPLNRRTKSNTAPAKSHKPPLKKQRKGISYEKPEVVSNDDEE
EEEEEEEEEEEVSEQSDEELGSDFSSEEEEDTEPLADDFLGGSDDEEEEGTLGSSDSDSD
GSDLEKESKAIDEEREREERDAKDELQMNIKEQPDEFRLPTKKELEEEASGPPDLPALQT
RIKEIVRILSNFKDLRPEGVKRKEFVEQLKADLASYYGYNEFLIGTLVEMFPPVELMELI
EAFEKKRPTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEY
LAGFYMLQSASSFLPVMALAPRENERVVDMAAAPGGKTTYVASLMKNTGIIYANEMKVPR
LKSLTANLHRMGVTNTVVCNYDGRELPKVFGQNSVDRVLLDAPCSGTGVISKDESVKTSK
SANDIRKFADLQKQLILAAIDLVDAESKTGGYIVYSTCSIMIPENEAVIDYALKKRDVKL
VPCGLDFGQAGFTRFREHRFHPTLEKTRRFYPHVHNMDGFFVAKLKKMSNETKASEGDEP
VETKEQAQLSSDDDEDDEPKQDTKVDENKRRTPISKPNNKGDKNKNTNVEGPRKQKKKRS
QWKAEIAQAREDKRKVMRKNTKEPGRK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctctaacgcgtaacaagaagaagggagctaagctgcagactgagactcctcca
ctgaataggcggacgaagtcgaatactgcgccggcgaaatctcataagcctccgttgaag
aaacagaggaaaggtatttcgtatgagaagcctgaagtagtttctaatgatgatgaggag
gaggaagaagaagaagaagaagaagaagaagaagtgagtgaacagtctgatgaagaattg
ggttctgacttttcctcagaggaggaggaggatacagagccattggccgacgactttctg
ggtggtagcgatgatgaagaggaggagggaactttgggttcttctgattctgactctgat
gggtctgatctcgagaaggagagtaaagctattgatgaagaacgtgaaagggaggaacga
gatgcaaaagatgaactccagatgaacattaaggagcaacctgatgagtttcgtctacca
accaaaaaggaacttgaagaagaggcaagtgggccaccagatcttcctgccttgcaaacg
aggattaaagagattgttagaatcctgtcgaattttaaggatttgaggccagaaggagtc
aagaggaaggagtttgttgagcagcttaaggctgatcttgcttcttattacggctataat
gagtttctcattggaactctcgttgagatgtttcctcccgttgaactcatggaactaatc
gaagcttttgaaaagaaaaggcctacgtctatacgaaccaacactcttaagactcggaga
cgggatctggctgatgtacttttgaacagaggagttaatctagatcccttaagcaagtgg
tcaaaagttggacttgtcgtttatgattcacaagttccaattggtgcaactcctgaatat
ttggctggtttctatatgttgcaaagtgctagttccttcttgccggtgatggctcttgct
cctcgagagaatgagcgggttgtggacatggctgctgcccctggtggtaaaacaacttat
gttgcttccctaatgaaaaacactggcataatatatgcaaacgagatgaaagtacctagg
cttaagtcacttactgccaatctgcatcgcatgggggtgacaaataccgtagtttgtaac
tatgatggaagagagctacccaaggtttttggtcagaactcggtagatagagtattgttg
gatgctccttgcagtggaactggagttatatcaaaagatgaatcagttaaaacttccaaa
agtgctaatgacataaggaaatttgccgatttgcaaaagcaacttatacttgctgcgatt
gatttggtggacgccgaatccaaaaccggtggatatattgtttactcaacatgctccatt
atgattcctgagaacgaagctgtcatcgattatgccctaaaaaagagggatgtcaaactt
gttccatgtggacttgattttgggcaagcaggatttaccagatttagagaacaccggttc
caccctactttggagaaaactagacgtttctatccccacgtacacaacatggacggattc
tttgtggcgaagctgaagaagatgagcaatgaaaccaaggcttcagaaggtgatgagccg
gttgaaacaaaagagcaagctcagttgtctagtgatgacgatgaggatgacgaaccgaag
caagacactaaagtagacgagaacaaacgaagaactccaatctcaaagccgaacaacaaa
ggcgacaagaacaaaaatactaacgtggaaggacccaggaagcaaaagaagaagagatca
caatggaaggctgaaattgctcaagctagggaagataaaaggaaagtcatgagaaagaat
actaaggagcctgggagaaaatag
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