Rissa tridactyla (black-legged kittiwake): 128902278
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Entry
128902278 CDS
T09443
Symbol
HEXB
Name
(RefSeq) beta-hexosaminidase subunit beta
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00511
Other glycan degradation
rtd00513
Various types of N-glycan biosynthesis
rtd00520
Amino sugar and nucleotide sugar metabolism
rtd00531
Glycosaminoglycan degradation
rtd00600
Sphingolipid metabolism
rtd00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rtd00604
Glycosphingolipid biosynthesis - ganglio series
rtd01100
Metabolic pathways
rtd04142
Lysosome
Module
rtd_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
128902278 (HEXB)
09103 Lipid metabolism
00600 Sphingolipid metabolism
128902278 (HEXB)
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
128902278 (HEXB)
00531 Glycosaminoglycan degradation
128902278 (HEXB)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
128902278 (HEXB)
00604 Glycosphingolipid biosynthesis - ganglio series
128902278 (HEXB)
00511 Other glycan degradation
128902278 (HEXB)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128902278 (HEXB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rtd03110
]
128902278 (HEXB)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
128902278 (HEXB)
Chaperones and folding catalysts [BR:
rtd03110
]
Intramolecular chaperones
Others
128902278 (HEXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
128902278
NCBI-ProteinID:
XP_054040909
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All DBs
Position
Z:59913316..59931817
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AA seq
560 aa
AA seq
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MGRAMGLAGLLLGLFLVPAVLVSTGFRHGVPPTEAAPEPAEWEPVSGSFREGSLWPLPQW
LRTSPRQLQLAPGRFQLVHGAGSSAGPDCGLLQDAFRRYYEYMFGQSPRWTRSRGPPGGR
GEPELSQLQVVIEAPDPGCHSYPHLASSEAYHLTVTEPVAILKADEVWGALRGLETFSQL
VHEDDYGSFLVNESEIDDFPRFAHRGILLDTSRHYLPLKSILTNLDAMAFNKFNVFHWHI
VDDQSFPYQSIYFPELSDKGAYSYNHIYTPTDISLVIEYARLRGIRVIPEFDTPGHTQSW
GKGQRDLLTPCYSGERPTGSFGPVNPILNTTYDFMTKFYREISSVFPDAYIHLGGDEVNF
DCWKSNPEVREFMRKQGFGIDYAKLESYYIQKILDIVSSYNKGYVVWQEVFDNKAELKPD
TVVQVWMGNNYAHELSSVTGAGFTAILAAPWYLDYISYGQDWKKYYSVEPLNFPGSEKQK
KLLIGGEACLWGEFVDATNLTPRLWPRASAVGERLWSSRNVTNLQDAYERLTNHRCRMLR
RGIAAEPVFVGYCPHEARGQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagccatggggctggccgggctgctgctggggctgttcctggtgcccgccgtg
cttgtaagcaccggctttcgccatggcgtcccgccgaccgaggccgcgccggagccggcc
gagtgggagccggtctcgggctccttccgtgagggctcgctgtggcccctgccgcagtgg
ctccgcacgtccccccgccagttgcagctggcccccggccgcttccagctggtgcacggc
gccggctcctcggcggggccggactgcggtctgctgcaggacgccttccgcaggtactac
gagtacatgttcgggcagtccccccggtggacgcggagccgcgggccgccgggcggccga
ggggagcccgagctgtcgcagctgcaggtggtgatcgaggccccggaccccggctgtcac
agttacccccacctcgcctccagcgaggcctatcatttaactgtaactgagcctgtggct
atactgaaagcagatgaggtatggggtgctttaagaggtttggaaaccttcagtcagttg
gttcatgaagatgactatggaagttttcttgtcaatgaatctgaaatcgatgacttccca
agatttgctcatagaggaatcttactagacacttcaaggcattatttaccattgaaatct
attcttacaaacctggatgccatggcttttaacaagttcaatgttttccactggcatata
gtagatgatcagtcattcccttaccagagtatttatttccctgagttaagtgacaaggga
gcgtactcctataaccacatctatactcctactgacatcagtctggtgattgagtatgcc
cggttaagaggcattagagttatcccagagtttgataccccaggacacacgcagtcttgg
ggaaaaggtcaaagagatcttctcaccccttgttacagtggagaacgtccaactgggtcc
tttggacctgtaaatcccattttgaatacaacttatgacttcatgactaaattctacaga
gagatcagcagtgtatttccagatgcttacattcatttgggaggagatgaagtaaacttc
gattgttggaaatctaaccctgaagtgagagagttcatgaggaagcaaggatttggcatt
gactacgcgaaactggaatcgtattatattcagaagattttggacattgtttcctcctat
aacaaaggatacgtggtctggcaagaagtgtttgataacaaagcagagctgaaaccagac
actgtagttcaagtgtggatgggaaacaactatgctcatgaactgagcagcgtcacagga
gctgggttcactgctatcctggcagctccctggtacttagactacattagttatggtcaa
gactggaagaaatactacagcgttgaaccacttaacttccctggatctgaaaaacagaaa
aagcttttaataggtggagaagcctgcctgtggggggaatttgtggatgcaactaacctc
acaccaagattatggcctcgggcaagtgctgtaggggaaagactctggagcagcaggaat
gtgaccaacttgcaggatgcctatgaaagactgactaatcaccgatgccgcatgctccgc
cgtggcatagcagcagaacctgtgtttgttggatactgcccccatgaagcaagagggcag
taa
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