Rissa tridactyla (black-legged kittiwake): 128902793
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Entry
128902793 CDS
T09443
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03022
Basal transcription factors
rtd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128902793 (GTF2H2)
09124 Replication and repair
03420 Nucleotide excision repair
128902793 (GTF2H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtd03021
]
128902793 (GTF2H2)
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128902793 (GTF2H2)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128902793 (GTF2H2)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128902793 (GTF2H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
IBR
Motif
Other DBs
NCBI-GeneID:
128902793
NCBI-ProteinID:
XP_054042334
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All DBs
Position
Z:complement(17829325..17842658)
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AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLCEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHITALKKAVDMNCSGEPSLYNSLHLAMQTLKHMPGHTSREVLVVFSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTILARETGGTYHVILDESHYKELLMHHVSPPP
ASSNSECSLIRMGFPQHTVASLADQDAKPSFSMAQLENNSEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYQGERYCQGCQGEMKDQNVYIC
KVCQNAFCVECDLFIHDSLHCCPGCIHKHTAPVPV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaacccgagcggaccaagcgctgggaagggggctatgagagaacatgggaa
atccttaaagaagatgagtccggatcgctgaaagccaccatcgaggacattcttttcaag
gcaaagaggaaaagactctgtgaacaccatggacaagttcgacttggaatgatgcgtcat
ctttatgtggttgttgatggatcaagaactatggaggaccaagatttgaaaccgaacaga
cttacttgcactttgaagttattggaatattttgttgaagaatactttgaccaaaatcct
attagtcagattggcttaattgtaaccaagagtaaaagagctgaaaaaatgacagaactt
tcaggtaactcaaaaaagcacataactgctctgaagaaagcagtggatatgaactgcagt
ggagagccatccctatataattccctacatttggccatgcagactttaaagcacatgcca
ggacacacaagcagagaggttttggtagtcttcagcagtctgacgacatgtgatccagcc
aacatctatgatctaattaagtgtttaaaagcagttaagatcagagtgtctgtcatcggc
ctaagtgctgaagttcgagtttgtacaatactcgcccgagaaactggtggaacataccac
gttattttagatgaaagtcattataaggaactgctgatgcatcatgttagtcctccacct
gccagttcaaattctgagtgctcccttattcgaatgggttttcctcagcatactgttgct
tctctagctgatcaggatgcaaagccatcctttagcatggcgcaattggaaaacaacagt
gagccgggtcttacactgggtggatatttctgtccccagtgcagagccaaatactgtgaa
cttcctgtggaatgcaaaatctgtggtcttacattagtgtctgcacctcacctggctcgg
tcttaccatcacttgtttcctttggatgcctttcaggaagttcccctggaagaatatcag
ggggaacggtattgtcaaggctgccagggagaaatgaaagatcaaaatgtttacatatgt
aaagtgtgtcagaatgcattttgtgtggaatgcgatttgtttattcatgattctctgcac
tgctgtcctggctgtattcacaagcacactgctcccgtacctgtatga
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