Rissa tridactyla (black-legged kittiwake): 128905437
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Entry
128905437 CDS
T09443
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128905437 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtd02000
]
128905437 (ABCB1)
04147 Exosome [BR:
rtd04147
]
128905437 (ABCB1)
04090 CD molecules [BR:
rtd04090
]
128905437 (ABCB1)
Enzymes [BR:
rtd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
128905437 (ABCB1)
Transporters [BR:
rtd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
128905437 (ABCB1)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128905437 (ABCB1)
CD molecules [BR:
rtd04090
]
Proteins
128905437 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
Rad17
RsgA_GTPase
AAA_5
AAA_15
AAA_28
AAA_29
G-alpha
AAA_14
AAA_30
DUF87
AAA_19
nSTAND1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
128905437
NCBI-ProteinID:
XP_054047510
LinkDB
All DBs
Position
2:144262359..144325882
Genome browser
AA seq
1284 aa
AA seq
DB search
MRSEDENKQKHAADGNSHEITASSQGHESKENHKEKKKKAEKAKMVSPFTLFRYSNWSDK
LLMILGTLLAIAHGSSLPVAMIIFGDMTDSFVNFGDKNHTANFTFDLVKLEEDMTRYAYY
YSGIAAGVLLAAYIQTSFWTLAAGRQIKKIREKFFHAIMRQEIGWFDVNDVGELNTRLLD
DVSKINEGIGDKIGLLVQAVTTFVTGFIVGLIRGWKLTLVILAVSPVLGLSAAIWAKVLS
AFTDKEQAAYAKAGAVAEEVLAAVRTVIAFGGQEKEIKRYYKNLEDAKKIGIKKAITSNI
SMGAAFLLIYASYALAFWYGTTLVIADDYTIGNVLTVFFSVLIGAFSIGQTAPSIEAFAS
ARGAAYTVFNIIDNEPQIDSYSDTGYKPDHIKGNLEFQNVYFNYPSRPDVEILKGLNLKI
SCGQTVALVGGSGCGKSTTVQLIQRFYDPKEGTVTIDGQDIKTLNVRYLREIIGVVNQEP
VLFATTIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPKKFETVVGERGAQLSGGQKQ
RIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTVVVAHRLSTVRNADH
IAVFEGGVITEQGNHFKLLERKGIYYKLVNMQAIEAEAPSSGVYENVLSVKKSESETEFE
ESFTKGLRRRSTRRSMKKPGAENDDSDEKTTSPGEELPPASFLKIMKLNKTEWPYFVAGT
LCAIINGALQPAFAIIFSEIIGIFSETDDNILREKSNLYSLLFLVLGIISFFTFFFQGFT
FGKAGEILTMRLRFMAFKAMLRQDMGWFDNPKNSTGALTTRLANDASQVKGATGVRLALT
AQNIANLGTGIIISLIYGWQLTLLLLAVVPIIAVAGMIEMKMLAGHAKKDKKELEAAGKI
ATEAIENIRTVVGLTREAKFESMYGEHLHVPYRNSVKKAHIFGFCFALSQAMMFFTYAGC
FRFGAYLVVNGHMKYKSVFLVFSAVVFGAMALGQSSSFAPDYAKAKISAAHLFMLFERVP
SIDSYSEEGEKPKTFGGNVMIKDVAFNYPNRPEVKILQGLNLKVEKGQTLALVGSSGCGK
STVVQLLERFYDPLDGEMLFDGKSSKTLNIQWLRAQIGIVSQEPMLFDCTIAENIAYGDN
TRQVSHEEIVKAAKEANIHSFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPQI
LLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADKIAVIQNGKVVEQGT
HQQLLAEKGIYYSLVNVQSGSCNM
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctgaggatgaaaacaagcaaaagcatgctgcagatggaaatagtcatgagatc
actgcatccagccagggtcatgaatccaaagaaaatcacaaggaaaagaagaagaaagca
gaaaaggctaagatggtcagcccatttacattgtttcgttactccaattggtcggataaa
ttactaatgatactaggcactctcctggcaatagcccatggaagcagtctaccagttgcg
atgataatttttggtgatatgactgatagctttgttaattttggagacaaaaatcataca
gcaaatttcacttttgatcttgtcaagctggaagaagatatgacaagatatgcatactac
tattctggaatagcagctggtgttcttcttgctgcttatatccaaacttcattttggacg
ctagcagcaggccgtcaaataaaaaaaattagagaaaaattttttcatgcaattatgaga
caggaaattggatggtttgatgtaaatgatgtgggagaactaaacactcgtcttctagat
gatgtctccaagattaatgaaggaataggtgacaaaattggattgctcgttcaagcagta
acaacatttgtaacaggatttattgttggtctcataagaggatggaaattaacccttgta
atactagcagtcagtcctgtactgggactttcagcagccatctgggcaaaggttctctct
gctttcactgacaaagaacaagctgcatatgcaaaagcaggtgctgttgcagaggaagtt
ctggcagcagtccgtactgtaatagcttttggaggacaggaaaaagaaattaaaagatac
tataaaaatttagaagatgctaaaaagattggaataaaaaaggctattacatctaatatt
tctatgggtgctgctttcttactgatctatgcatcatatgcactggccttctggtatgga
acaaccttggtcatcgctgatgattacactattggcaatgttcttacggtctttttctct
gtattgattggagctttcagcattggacagactgctccaagcatagaggcatttgctagt
gcaagaggagctgcctacacagtctttaatatcatagacaacgagcctcaaattgatagt
tattcagacacaggttataaaccagaccacattaaagggaacttggaattccaaaatgtt
tacttcaattatccatccagaccagatgttgagatactgaagggcttgaatctcaagatt
agctgtggccagacagtggccctggttggtggcagtggctgtgggaaaagtacgactgtt
cagctcatccagagattttatgatcccaaggaaggcacggtgaccattgacgggcaggat
attaagaccttaaatgtaagatatctgcgggagattattggtgtggtgaatcaggagcct
gtgctctttgctactaccattgcagaaaacattcgttatggccgtgaggatgtgaccatg
gaagagattgaaaaagctaccaaggaagcgaacgcttatgacttcatcatgaagctaccc
aaaaagtttgaaaccgtggttggagaaagaggggcacagctgagtggaggccagaagcaa
agaatagcaattgcccgagctctggttcgcaatcctaaaattcttcttcttgatgaggca
acatcagctttggatactgagagtgaatcagttgtgcaggcagcactggacaaggcaagg
gaaggacgcaccacggttgtagtagctcaccgactgtcaacagtcagaaatgcagaccat
atagctgtatttgaaggtggagtgataacagaacaagggaatcattttaaattgctcgag
agaaagggaatctactacaaactcgtaaacatgcaggcaatagaagctgaagctccatca
tcaggagtatatgagaatgtacttagtgtcaaaaaaagtgaatctgaaacagaatttgaa
gaatcctttacaaagggattgagaagacgatcaacacggagaagcatgaaaaagccagga
gcagaaaatgatgattctgatgagaaaactacttcacctggtgaagaattacctccagct
tcatttctgaaaattatgaagttgaacaaaactgaatggccatactttgtagctggaact
ttgtgtgcaattatcaatggagctttacaacctgcatttgcaatcatattttcagaaatt
atagggattttttcagaaaccgatgacaacattttaagagaaaagagcaacttatattcc
ctgctgtttttagtacttgggatcatttccttttttactttcttttttcagggtttcaca
tttggcaaagctggagaaattcttacaatgaggcttcgattcatggcatttaaagcaatg
cttagacaggacatgggctggtttgataatcctaaaaatagcactggagcattaactaca
agacttgctaatgatgcctcacaagtgaaaggagcaactggtgtcagactggcattaact
gcccaaaatatagctaacctggggactggaattattatatcattaatttatggctggcag
ctgaccctgctacttttagctgttgtgccaatcattgcagtggcaggaatgattgaaatg
aagatgttggctgggcatgctaaaaaagataaaaaagagctggaagctgcaggaaagatt
gccacagaagccatagaaaatattagaactgttgttggtttgacccgagaagcaaaattt
gagtccatgtatggagaacatttgcacgtaccatacagaaattctgtgaagaaggcacat
atatttggattttgttttgccctttcacaagcaatgatgttctttacctatgctggctgt
ttccgatttggtgcctatctagtggtaaatggacacatgaagtataaaagtgtgtttttg
gtgttttcagctgttgtatttggtgcaatggcattaggacaaagcagttcttttgctcca
gactatgccaaagccaagatatcagctgcccacttgttcatgctgtttgaaagagtaccc
tccatagatagctacagcgaggaaggagagaagcctaaaacatttgggggaaacgtaatg
atcaaagatgtggcgtttaactacccaaaccgaccagaggtcaaaatcctccaaggtttg
aatctgaaagtagaaaagggacaaactttggctcttgttggtagcagtggctgtggaaag
agcaccgttgttcagctgcttgagagattttatgatccacttgatggagaaatgcttttt
gatggcaaaagttcaaagacactaaatatccagtggctgagagctcagattggtattgtc
tcacaagaaccaatgctgtttgactgcactattgctgaaaacatcgcatatggggataac
actcggcaggtgtcacatgaggaaattgttaaggcagcaaaagaagccaacattcattcc
ttcattgactctctgccagataaatacaatacccgtgtaggagacaagggaactcagctt
tctggtggtcagaaacaacgtattgctattgcccgagctcttgtacgtcagccccaaatt
ctgctactggatgaagctacgtctgccttagatacagaaagtgaaaagattgtccaggaa
gctctggataaagccagagaaggtcgcacctgcatcgtgatagctcaccgcctctccacc
atccaaaatgctgacaagattgccgtgatccagaatggaaaggtcgtagagcaagggacc
catcagcagctcctggctgaaaaaggcatctactattctctggtcaatgttcaaagtggg
tcatgcaacatgtaa
DBGET
integrated database retrieval system
