Rissa tridactyla (black-legged kittiwake): 128909143
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Entry
128909143 CDS
T09443
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtd01002
]
128909143 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128909143 (USP47)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128909143 (USP47)
Peptidases and inhibitors [BR:
rtd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128909143 (USP47)
Ubiquitin system [BR:
rtd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128909143 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
128909143
NCBI-ProteinID:
XP_054056398
LinkDB
All DBs
Position
4:complement(11695397..11754150)
Genome browser
AA seq
1434 aa
AA seq
DB search
MAAIFPNDWRWWRGRALPSPAGAAAAEEEDEPRASPRLPLLTTTLSSACCGPSAAPPAMV
PSEENQLVPKEDMFWSCRQSIFAEMKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERVTL
NLPASTPLKRLFEDVASKVGYVNGTFDLVWGNGDNVTDTQTPIDQNSDKTILDAGFEPGK
KNFLHLTDKDGEQPHIMPEESGTTDDSAQDRLIGPLPREGSVGCTNDYVSQSYSYSSVLS
KSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFV
LLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLY
QGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQ
YFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFI
DVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSE
KSSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSG
SRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQRE
IERNTCKIKLFCMHPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKY
DEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQVFQCYKPGEVMVKVHVV
DLKTESVAPPISIRAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNVSSKTL
KAEGFFRSNKVFIESSESLDRHVAYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQFRRAV
YQKSSGDSGNLDEGCERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKSTE
ASDFENIESPLNEIDSSTSAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDI
LSSSHSSDTLCNVDNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDE
SGKSRGEAQYMYFKSEPYAADEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFK
VFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFL
LDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDIN
ISSNWEVFLEILDGVEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSE
ISGIPLENIEFAKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKT
EELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcggccattttccccaatgattggcggtggtggagggggcgggcgctgccctcgccg
gctggggcggcggcggcggaggaggaggatgagccgcgggcgtccccccgcctcccgctg
ctgacgacgacgctcagctcagcctgctgcgggcccagcgccgcgccaccggccatggtg
cccagcgaggagaatcagctcgtccccaaagaggatatgttttggagttgcagacaaagt
atctttgctgaaatgaagaagaaattttcacaggtggaaagtgctgctgaagaaccgagg
gtgctgtgtataatacaagataccacaaattccaagacagtgaacgagcgtgttaccttg
aacctgccagcttccacaccactgaaaaggctgtttgaagatgtggcttcaaaagtgggc
tatgtgaatggaacttttgatttagtgtggggaaatggagataatgtaactgatacgcag
actccaatagatcagaacagtgacaaaactattcttgatgctggttttgagccagggaag
aagaactttctgcatttgacagacaaagatggtgagcagcctcatataatgccggaggag
tcaggtacaacagatgacagcgcgcaagacagacttataggccctcttccaagagagggc
tctgttggctgtaccaatgactatgtcagtcaaagctactcttattcttcagtcctgagc
aaatcagagacaggttatgtggggctagtaaatcaagcaatgacttgctacttgaacagc
cttctacaaacgcttttcatgactcctgaatttagaaatgcattatataaatgggaattt
gaagaatctgaagaggatcctgtgacgagtatcccctaccagcttcaaagactgtttgtt
ttactgcagaccagcaaaaaaagagcaattgaaacaacagatgttacccggagtttcgga
tgggatagtagtgaggcatggcagcaacatgatgtacaggagctttgtagagtcatgttt
gatgctttggagcagaaatggaagcaaacagaacaggctgatcttataaatcaactgtat
caaggcaaactgaaggactatgtaagatgtctagaatgtggctatgaaggctggagaatc
gacacttacctggatattcctttggtcatccggccgtatggctccaaccaggcgtttgct
agcgtggaagaagcactgcatgctttcattcagcctgagattcttgatggccccaatcag
tatttttgtgaacgatgtaagaagaaatgtgatgcaaggaagggtctgcggttcttgcat
tttccatatttgctgacattacagctgaagagatttgacttcgattataccactatgcac
agaattaaactcaatgatcgtatgacttttcctgaggagttagacatgagtgtcttcatt
gatgttgaagatgagaagtctcctcagaccgagagttgtaccgacagtggagctgaaaat
gaaggcagctgtcacagtgatcagatgagcaatgatttttccaatgatgatggagttgat
gaaggaatctgccttgaaagcaatagtgcagcagaaagaatttctaaagctggcagtgaa
aagagttctttactgtatgaactcttttctgttatggttcattctggaagtgctgctggt
ggccattattatgcctgtataaaatcttttagtgacgaccagtggtacagctttaatgat
cagcatgttagcaagataactcaggaagatattaagaaaacgtatggtggatcttctgga
agcagaggctattattccagtgcttttgctagctccacaaatgcatacatgctgatatat
agactgaaggatccaacaagaaatgcaaagtttcttgaggcacatgagtatccagagcat
attaaacaattggtacagaaagagagagaactggaagaacaagaaaagaggcaacgtgaa
attgagcgcaacacttgcaagattaaattgttctgcatgcatcctacaaaacaaataatg
atggagaacaaattagaggttcataaggacaggacactcaaagaagctgtggaaatagct
tacaagctaatggacttagaagaggccgttcctttggattgctgtcgtcttgtcaaatac
gatgagttccatgactacttggaacgatcttatgaaggagaagaggatacaccgatgggt
ttattacttggaggtgtcaaatcaacatacatgtttgacttactgttggaaacaagaaga
cctgaccaagttttccagtgctataaacctggtgaggtcatggtaaaggttcatgtagtt
gacctaaagactgaatctgttgctcctccaataagcatacgagcttatttgaatcaaaca
gtttcagaatttaaacagctaatttcaaaggctacgcacctgcccgctgaaacaatgcgg
gtggtattggaacgttgctacaatgacttgcgtcttctgaatgtttccagtaaaacactg
aaagctgaaggcttttttagaagcaacaaggtatttattgaaagttcagagtctttagat
cgtcatgttgcatatacagactctcatctatggaaacttttggatcgtcacgccaataca
atcagactgtatgtttcgttaccagagcaatcacctggatctcagtttaggcgagcagtt
tatcaaaagtctagtggagattcaggcaacttggatgaaggctgtgaaagagtaaaagga
cctgtaggtaatatgaaatctgtagaggcaattcttgaagaaagcaccgagaagcttaaa
agcttgtccctgcagcagcagcaggagggggataatggagacagcagcaaaagcacagaa
gccagtgattttgaaaacatcgaatcacctttaaatgaaatagactcttcaacatcagca
gaaaacagagaacttgaaaaccaaattcagatttctgatccagaaaatctgcagtccgag
gaacggtcggattcagatgtaaataacgacaggagtacaagttccgtggacagtgatatc
ctcagctccagtcacagcagtgatactttatgcaacgtggacaatgccccgcttcccctg
gccaatggacttgattctcatagcatcacaagtagtaggcgatcaaaagcaaatcagggg
aagaaagaaacctgggacacagcagaagaagattctggaacagacagcgaatacgatgaa
agtggcaagagcagaggagaagcacaatatatgtactttaagtcagaaccttatgctgca
gatgaaggttcaggagaagggcaaaaatggctgatggtgcatgttgataaaagaattaca
ctgtctgccttcaagcaacatttggagccttttgttggagttccatcttctcacttcaaa
gtctttagagtctacgccagcaatcaagagtttgagagcgttcggctgaatgagacactt
tcatcgttttctgatgacaataagataactattagacttggaagagcccttaagaagggt
gaatacagagtcaaagtctatcaacttttggtaaatgagccagagccatgcaagtttctt
ctagatgcagtttttgctaaaggaatgactgtccgacagtcgaaagaggagctgcttcct
cagcttcgagaacaatgcggcctagacttgacaattgacaggtttcgcctacgaaagaaa
acctggaagaacccaggcactgtgtttctggattatcatatctatgaagaagatatcaat
atttcaagcaattgggaggtcttcttagaaatacttgatggagtagaaaagatgaaatcc
atgtcacaacttgctgttttatcaaggcgatggaggccatcagagatgaaactagattct
ttccaggaagtagtactagaaagcagcagtgttgaagaattaaaagagaagctgagtgaa
ataagtggaatacccttagaaaacattgaatttgcaaagggcagaggaacgtttccatgt
gacatttccatactagagattcaccaagacttggactggaatcctaaagtatctacattg
aatgtctggcctctgtacatttgtgatgatggtgcagtaatattttatagggataaaact
gaagaattaatggaattaacagatgagcagagaaatgaactgatgaaaaaagaaagcagc
agactccagaagactggacaccgggtaacctactctcctcgtaaagaaaaagcactaaaa
atttatctggatggagcaccaaataaagatttgactcaagactga
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