Rissa tridactyla (black-legged kittiwake): 128909394
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Entry
128909394 CDS
T09443
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128909394 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128909394 (COPB1)
Membrane trafficking [BR:
rtd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128909394 (COPB1)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128909394 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
128909394
NCBI-ProteinID:
XP_054056979
LinkDB
All DBs
Position
4:complement(14414909..14433957)
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKETGELKPEEEVSVGPAQKLVTEMGTYATQSALSSSRPAKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVSLVQEKKKQNSFIAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMSSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIVDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagagaacgtgtgttacacgttaatcaatgttccgatggattcagaacca
ccttctgaaatcagcttaaaaaatgacctagaaaaaggagatgtcaaattgaagacggag
gccttgaagaaagtaatcattatgattctgaatggtgaaaaactacccgggcttctgatg
accattatacgttttgtactgcctctgcaagatcatactatcaaaaaactgctgcttgtc
ttttgggagatagtgccaaagaccactccagatggcaggcttttgcaagaaatgatcctt
gtgtgcgatgcatacagaaaggatcttcagcacccaaatgaatttatccgaggctctact
ctccgttttctttgtaagctgaaagaagcagaactgttggagcctttgatgccggccatt
cgtgcatgtctagaacatcgtcacagctacgtgcgcagaaacgcagttcttgcgatttac
acgatttatagaaattttgaacatcttatacctgatgctcctgaactgatccatgatttc
ttggtgaatgagaaagatgcaagctgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatttgagtacctgtattgaccaagtccagacatttggt
gacatactgcagttggttattgttgaactgatttataaggtgtgtcacgcaaatccatca
gagagagctcggtttattcgctgcatctacaacttactgcagtcgtcaagtcctgcggtg
aagtatgaagctgcaggtactctagttacgctttccagtgcaccaacagcaatcaaggca
gctgcccaatgctacatagatttgattattaaagaaagtgataacaatgtgaaactgatt
gttttggatcggctgattgaattaaaggagcatccctcccacgaacgagtattacaggat
ctagttatggacatcctcagagtgttgagtaccccagatctagaagtgcgcaaaaaaacc
cttcaactggctctggatcttgtctcttcaagaaatgtggaggagcttgtgattgttctg
aagaaggaagtgattaaaaccaataatgtgacggagcatgaagatacggacaagtataga
cagctgcttgttcgtacattgcattcctgtagcgttcggtttccagatatggctgcaaat
gttattccagtgctgatggagttcctcagtgataataatgaagcggcagctgctgatgtt
ttggagtttgtgcgggaagcgatccagcgatttgacaacctcagacctcttattgttgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttatcgaggagctttatgg
atccttggagagtattgcagcacaaaggaggatatacaaagtgtaatgacagaagttcgc
agatcacttggagagatcccgatagtagaatctgaaatcaagaaagaaactggtgagcta
aaacctgaagaagaggtgtctgtgggtccagcccaaaaattggtgacagagatgggcact
tatgcaacacagagtgctctcagtagttcccgacctgccaaaaaggaagaagacagacct
ccgttacgaggattcctgcttgatggcgatttctttgtggcagcttctcttgctacaact
ttaactaagattgctttacgatatgtgtcactagttcaggaaaagaagaaacagaattcc
tttattgctgaagctatgctgctgatggccactattctccatttgggaaagtcctctctt
cccaagaagccgattacagatgacgatgtggatcgtatttccctgtgtctgaaagttttg
tcagaatgttctcctctcatgaatgacattttcaacaaagaatgcaggcagtccctctct
catatgctgtcagccaagctagaagaggagaaactttcccagaagaaagaatctgagaag
aggaatgtgacggttcagccagacgatcccatttccttcatgcagcttactgctaaaaat
gaaatgagctcaaaagaagaccagtttcagcttagccttcttgcggcaatgggaaacaca
cagaggaaagaggctgctgatcctcttgcatccaaacttaataaggttactcaactgaca
ggtttctcagaccctgtctatgcagaagcgtatgtccatgtcaatcagtacgacattgtg
ctggatgtgcttgtggtgaaccagaccagtgacactctgcagaactgcacactggaacta
gccacgctaggtgacttgaaacttgtggaaaaaccatctcctctgacactcgctccacat
gactttgcaaacattaaagccaatgtcaaagtcgcttcaacagaaaacggaataattttt
ggtaatattgtgtatgatgtctctggagcagcaagcgacagaaactgtgtggttctcagt
gatattcacattgacatcatggattacatccagcctgcttcttgtacggatgcggagttt
agacagatgtgggcggaatttgagtgggaaaacaaagttacggtgaataccaacatcgtt
gatctaaatgaatacttacagcacatactgaagtcaaccaatatgaaatgcctgactcca
gagaaggcactttctggttattgtggctttatggcagccaatctttatgcgcgttccata
tttggagaagatgcacttgcaaatgtcagcattgaaaagccaattcatcttggaccagag
gcacctgtcactggtcacatacgaatccgcgccaagagtcagggaatggccctgagtctt
ggagataagatcaatttgtctcagaagaaaacaagtttataa
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