Rissa tridactyla (black-legged kittiwake): 128913120
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Entry
128913120 CDS
T09443
Symbol
CHPF
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rtd01100
Metabolic pathways
Module
rtd_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128913120 (CHPF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtd01003
]
128913120 (CHPF)
Enzymes [BR:
rtd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
128913120 (CHPF)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
128913120 (CHPF)
Glycosyltransferases [BR:
rtd01003
]
Glycan extension
O-Glycan
128913120 (CHPF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
128913120
NCBI-ProteinID:
XP_054066160
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All DBs
Position
7:complement(18460429..18465851)
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AA seq
776 aa
AA seq
DB search
MRLSLVLSVLRPAGPVAIGVSLGFTLSLLSVTWVEEPCGPPPRSDARPRPDGGGGGPALP
PGPANTNGNAVRRPNAVPAGLGADSWEPRVVPYRPPSPGRAAKKAVRTRYISTELGMRQR
LFVGVLTSKSTLNTLGVAVNRTLAHRLERLVYFTGTRGRKVPHGMTVVTHSDERPIWNMY
QTIRYLLDHYVNDFDWFFLVQDDTYTEAHRISRLVAHLSIDTHLYLGRPEEFIGGDTEGR
YCYGGFGYLLSRSLLLLLQHHLESCRNDILSARPDEWLGRCIIDYTGINCAEEHEGLHYH
YFELGKNVDPERETDLRFQSAFTVHPVLDPLQMYRLHKYFAQVELERTYQEIQQLQLEIQ
NASSLSADGDHGATWPIGIPPPFQPKTRFEVLRWDYFTEEQVYACVDGSPKCELRGADLA
DVADVVATAMEELNRKYQPVLHVRKQQLVNGYRRFDPTRGMEYTLDLQVEVVTQKGHSRS
VTKRVHLVRPLSEVEIIPMPYVTEASRINVILPLTAHDRDHAARFLEAYAAAAFESSENA
VLTFLFIYDPFEAQQVTQNDIFASVKAQITEYEHKYAEVKIPWISVKTDAPSQIKVMDII
SKKHPVDTLFFVAGVGTEVTVDFLNRCRMNTINNWQVFFPIHFQGYNPAIAYHNQVPPPT
LDLLRDAGRFDRDVFHEACFYNADYMAARTRMAGDVQENEDILETLDIYDMFIKYSNLHV
FRAVEPALLQRYRHQACNPRLSEEIYHRCMQSSLEGVGSRSQLAMVLFEQEQGNST
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcggctctcgctggtgctgtcggtgctgcggcccgccgggccggtggccatcggcgtc
tcgctgggcttcaccctcagcctgctcagcgtcacctgggtggaggagccctgcgggcct
ccgccgcgctccgacgcccgcccgcgccccgacggcggcggcggcggccccgctcttccc
cccggccccgccaacaccaacggcaacgcggtgcgcaggcccaacgccgtgcccgccggc
ctgggcgccgacagctgggagccccgcgtcgtgccctaccgcccgcccagccccggcagg
gccgccaagaaggccgtcaggacccggtacatcagcacggagctggggatgcggcagcgg
ctcttcgtcggtgtgctgacctccaaaagcacgctgaacacgctgggggtggccgtcaac
cgcacactggcccaccgcctggagcgcctggtgtacttcacgggcacgcggggccgcaag
gtgccccacggcatgacggtggtgacgcacagtgacgagcggcccatctggaacatgtac
cagaccatcaggtaccttctggaccactatgtgaatgacttcgactggttcttcctggtg
caggacgatacctacacagaggcacaccgcatcagccgcctggtcgcccacctcagcatc
gacacccatctttacctgggccgtcccgaggaattcattggtggggacacggagggacgc
tactgctatgggggtttcggctacctgctatcccgaagcctcctcctgctcctgcagcac
cacctggagagctgtcgcaacgacatcctcagcgcccggccggatgagtggctgggccgc
tgcatcatcgactacacgggcatcaactgtgccgaggagcacgagggcctccattaccac
tacttcgagctcgggaagaacgtggaccctgagcgggagaccgacctccgtttccagagt
gccttcactgtccatcccgtgctggatcccctccagatgtaccggctgcacaagtacttc
gcacaggtggagctggagaggacgtaccaggagatccagcagctccagctggagatccag
aatgccagcagcctgtctgccgacggggaccatggtgccacatggcctattggtatacca
ccacccttccagcccaaaacccgcttcgaggtgctgcgctgggactatttcacagaggag
caggtctacgcctgcgtggacggctcccccaagtgtgagctgcgcggcgcagacctggct
gacgtggccgacgtggtggcgacggctatggaggagctgaaccgcaagtaccagccagtc
cttcacgtccgcaagcagcagctggtgaatgggtaccggcgcttcgacccgacacgtggc
atggagtacacactggacctccaagtggaggtggtcacccagaagggtcacagccgctcc
gtcaccaagcgcgtgcacctggtgcggcccctcagcgaggtggagatcatccccatgccc
tatgtgaccgaggccagccgcatcaacgtcatcctgccactgactgcccatgaccgggac
catgctgcccgctttttggaggcttacgcggcggctgcctttgagagcagcgagaacgca
gtactcaccttcctgttcatctatgacccctttgaggcccagcaggtaacccagaatgac
atctttgcctctgtgaaggcccagatcactgagtacgagcacaagtatgcagaggtgaag
atcccgtggatcagcgtcaagacagacgcaccctcccaaatcaaggtcatggacatcatc
tccaagaagcatcccgtagacacacttttctttgtggccggtgtggggacagaggtcact
gttgacttcctgaaccgttgccggatgaacaccatcaacaactggcaggtcttcttcccc
atccacttccagggctacaacccagccattgcctaccacaaccaggtgccgccccctacg
ctggacctgctgcgggacgcggggcgcttcgaccgcgacgtcttccatgaagcctgcttc
tacaatgccgactacatggcggcacgcacccgcatggcgggtgatgtgcaggagaacgag
gacatcctggagaccctggacatctacgacatgttcatcaagtactccaacctgcacgtc
ttccgggctgtggagcctgccttgctgcagcgttaccggcaccaggcctgcaacccccgg
ctcagtgaggagatctaccaccgctgcatgcagagcagcctggagggcgtaggctctcgc
tctcagctggccatggtgctttttgagcaggaacaagggaacagcacctga
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