Rissa tridactyla (black-legged kittiwake): 128916212
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Entry
128916212 CDS
T09443
Name
(RefSeq) protocadherin gamma-B5-like
KO
K16496
protocadherin gamma subfamily B
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128916212
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Protocadherins
128916212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
128916212
NCBI-ProteinID:
XP_054073548
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Position
11:complement(20609223..20612038)
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AA seq
827 aa
AA seq
DB search
MAVRQRQSRQRAVGRAVLLPALLLVLCCRAAAERIRYAIPEELGRGSLVGPLARDLGLSP
AELPARKLRLSAEKQYFTVSGENGNLYVSERLDREEMCGESASCSVSFEALVQNPLNVFH
VEVAIQDANDNAPHFLQDNFQLEISELTSPGARFYLGIAEDPDVGSNSLQGYELESNAYF
EVEVKESQDGSKFAELVLRRALDRESEQSVRLVLTAVDGGDPPRSGTAQLCINVTDANDN
PPVFAQDRYRTSLREDAPPGSTVLNVSASDADAGTNARITYGFGKMPAKVLQKFVVEAES
GTIRLQEALDFEDTRAFSLAVEARDGGGLVAHCEVEVEVLDVNDNAPEITVTSVSSPVPE
DAPAGTVVALLKVRDRDSGENGQVWCELSGEAPLSMVSSSVGSYKVVTASALDREQASEH
RVTVVARDRGSPSLSSRASLVLEVSDVNDNAPVFEEAAYSAYVSENNAAGAPVVRVRARD
ADAGANGRVSYWLAGGSAGAAPYVSVEARSGAVYAQRSFDYEQCREFAVAVRAQDGGAPS
RSSTATVRVFVLDRNDNAPRVLWPPAAAAGASGSGASSLPAAFEVVPRSAEAGYLVGKVV
AVDADAGRNAWLSYELVQASEPALFRVGLHSGEVRTARAVSERDAAKQRVVAVVKDHGQP
ALSATATLHVVLAESLQEALPELSERAAGADSAAELQFYLVLALALLSALFLLSVALAVL
ARLRRAGPPAVLRCLGAQRFSVPGAAFPADFCEGTLPYSYNLCVAPARAVAEGAWLPPPL
PSVPAEELLGAEPCGKPTPSSSAGAGEPSTDADAPQVCKPSRSRCFP
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaggcagaggcagagcaggcagcgagctgtggggcgagcggtgctgctgccc
gctttgctgctggtgttgtgctgccgggcggcggcggagcgaatccggtacgccatcccc
gaggagctgggcagaggctcgctggtggggccgctggcgcgggacctggggctgagcccg
gcggagctgccggcacgcaagctgcggctcagcgcggagaagcaatacttcacggtgagc
ggggagaacgggaacctgtacgtgagcgagaggctggaccgggaggagatgtgcggcgag
tcggcgtcctgctccgtcagcttcgaggcgctggtgcagaacccgctcaacgttttccac
gtcgaggtggccatccaggacgccaacgacaacgcgccgcacttcctacaagacaatttc
cagctggagatcagcgagttgacttctcccggagctcggttctacttgggcatagcggaa
gacccggacgtgggcagcaactcactgcagggctacgagctggagagcaacgcatacttc
gaggtggaggtgaaggagagccaggacggcagcaagttcgcggagctggtgctgcgccgt
gcgctggaccgggagagcgagcagagcgtgcgtctggtgctgacggcggtggacggcggc
gatccgccccgcagcggcaccgcccagctctgcatcaacgtcacggacgccaacgacaac
ccacccgtgttcgcacaggaccggtaccgcacaagcctgcgcgaggacgcgccgccgggc
tcgacggtgctgaacgtctccgcctccgacgccgacgccggcaccaacgcacgcatcacc
tacggcttcgggaaaatgccggccaaggtgcttcagaagttcgtggtggaggcggagagc
gggacgatcaggctgcaggaggcgctggacttcgaggacacgcgcgcgttcagcctggcc
gtggaggcgagggacgggggcggtctggtggcgcactgcgaagtggaagtggaggtgctg
gacgtgaacgacaacgcgcccgaaatcacggtgacgtcggtgtcgagccctgtgcccgag
gacgcgccggccggcacggtggtggccctgttgaaagtgcgggaccgtgactccggggag
aacggtcaggtgtggtgcgagctgtcgggcgaggcgccgctgtcgatggtgtcgtcgtcg
gtggggtcgtacaaggtggtgacggcgagcgcgctggaccgcgagcaggcgtccgagcac
cgagtgacggtggtggccagggaccggggcagcccgtcgctgtcgagccgcgcgtcgctg
gtgctggaggtgtcggacgtgaacgacaacgcgccggtgttcgaggaggcggcctacagc
gcctacgtgtcggagaacaacgcggcgggcgcgccggtggtgcgcgtgcgcgcgcgggac
gcggacgcgggcgccaacgggcgcgtgagctactggctggcgggcggcagcgcgggcgcg
gcgccctacgtgtcggtggaggcgcggagcggcgcggtgtacgcgcagcgctccttcgac
tacgagcagtgccgcgagttcgcggtggcggtgcgggcgcaggacggcggggcgccgtcg
cggagctccacggccacggtgcgcgtcttcgtgctggaccgcaacgacaacgcgccgcgg
gtgctctggccgccggcggcggcggcgggagcgtcgggttcgggagcgtcgtcgttgccg
gcggcgttcgaggtggtgccgcgttcggccgaggccggctacctggtgggcaaggtggtg
gcggtggacgcggacgcggggcgcaacgcgtggctgtcgtacgagctggtgcaggcgtcg
gagccggcgctgttccgcgtggggctgcacagcggcgaggtgcggacggcgcgggccgtg
tcggagagggacgcggcgaagcagcgtgtggtggccgtggtgaaggaccacgggcagccg
gcgctgtcggccacggccacgctgcacgtggtgctggccgagagcttgcaggaggcgctg
ccggagctgagcgagcgggcggcgggcgccgactcggcggccgagctgcagttctacctg
gtgctggcgctggcgctgctctccgccctcttcctgctgagcgtggcgctggccgtgctg
gcgcggctgcgccgggccgggccgcccgccgtgctgcgctgcctgggcgcgcagcgcttc
tccgtgcccggcgccgccttcccggccgacttctgcgagggcaccttgccctactcctac
aacctgtgcgtggcgccggcacgcgccgtggccgagggcgcttggctgccgccaccgctg
cccagcgtgcccgcggaggagctgctcggtgcggagccctgcgggaagccgaccccgagc
agcagcgccggcgcgggagagccgtccaccgacgccgacgccccgcaggtgtgtaagccc
tctcgctctcgctgttttccttga
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