Rissa tridactyla (black-legged kittiwake): 128917372
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Entry
128917372 CDS
T09443
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128917372 (RC3H2)
04121 Ubiquitin system [BR:
rtd04121
]
128917372 (RC3H2)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
128917372 (RC3H2)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128917372 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
128917372
NCBI-ProteinID:
XP_054076254
LinkDB
All DBs
Position
14:complement(4371616..4404713)
Genome browser
AA seq
1204 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIATLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEVGSQRTLFSLPVSFSESVSDLSGT
KFEEDHLSHYSPWSCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRR
AKEEDPIIPFSDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNA
VDSRWSAYGSDSPSSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREA
NALAMQQKWNSLDEGSRLTLNLLSKEIDLRNGETDYTEDCADAKPDRDIELELSALDTDE
PDGQGEQIEEILDIQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILE
EQKTILPVTSCFSQPIPTSVSNASCLPISTAVSGGSPSLKTAHIMSEDKNDFLKPVANGR
MVNS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtgaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaaacttgtgacactggtgaattgt
cagctggtagaggaagagggtcgggttagagctatgagggcagctcgatcactgggagag
agaaccgttacagaactgatcttgcagcaccagaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttatgaggctttgcggagagaacat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcccacatgcaatccattattgacaag
ctccaatctccagaatcttttgcaaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcgtctccaacatgggagcagctggaaaatgcaatggtcgct
gtaaagactgtggtacatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgtttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggcgtaaatagcaccgtctcaaccacaacaggaaacgtcatttctgtcata
ggaagccctgaagcaacagggaagatggtgccaagcactaacggaatagctactctagaa
agtggtgttccccagttgatccctcgctgtgcagacacctccttgagagctttggagaac
acgaagaagggagggaagactggagccaatggtcagaatgtttctggatcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccatttgttcccagagtacccgtctaccctccgcattctgataatgttcaatatttccaa
gatcccaggactcagctgtcatacgaagttccacagtaccctcagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggc
tattactctgtggcttgtcaacctccaaacgaacagaggactgtgcctttaccgagggag
ccttgtggtcatttgaagactggttatgatgagcaattaagacggaagccggagcaatgg
gcacagtaccacacacagaaaactcctctggtatcgtcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagaggtgggaagccag
agaactttattttcccttcctgtttctttctcggagagtgtcagtgatttgagtggaact
aaatttgaggaagaccatctctctcactattcaccgtggtcttgtggcactattgggtct
tgtataaatgctatcgactcagagcccaaggatgtgattgccaattcaaatgccgtgcta
atggatttggacagcggggatgttaaaaggagagtacatttgtttgaaactcagagaagg
gcaaaggaagaagatcctataatcccatttagcgatggaccgattatctccaagtggggt
gcaatctccaggtcatcccgcacgggttatcacacgacagatcctattcaggccactgct
tcccaaggaagtgctacgaagcccatcagtgtatcagattatgtcccttatgtcaatgct
gttgactcaagatggagtgcctatggctcagattctccttcatcagcacgttatgcggaa
cgggacaggttcatagttacagatttgtctggtcacagaaagcattccagcactggagat
ctactgagtattgagttacagcaggccaaaagtaactcgttattacttcaaagagaggcg
aatgcactagccatgcagcagaagtggaattctctagatgaaggcagtcgtcttacctta
aatcttttaagcaaggaaattgatttgaggaatggtgagactgattatactgaagattgt
gcagacgcaaagccagatcgagacattgaattggagctgtcagcccttgatacagatgaa
cctgatgggcaaggtgaacaaattgaagagattctggatatacagctaggtattagttct
caagatgatcagctgctcaatggaacaactgtagagaatgggcacccactaaagcagcac
cagaaagaatctatggaacagaagagacaaagtttaggtgaagaccttgtgattctggag
gagcagaaaacaatcctgcccgtaacttcttgcttcagtcagccgatcccaacatctgtt
agcaatgcaagctgcctgcccatcagcaccgcagtcagtggtggcagccccagtttgaaa
actgctcacattatgtctgaggataaaaatgactttttaaagcctgttgcaaatggcagg
atggttaacagctga
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integrated database retrieval system
