Rissa tridactyla (black-legged kittiwake): 128918089
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Entry
128918089 CDS
T09443
Symbol
TRIM16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128918089 (TRIM16)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128918089 (TRIM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
Motif
Other DBs
NCBI-GeneID:
128918089
NCBI-ProteinID:
XP_054077943
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Position
15:complement(5331180..5335468)
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AA seq
329 aa
AA seq
DB search
MFVPGELPPNLGLEGSTFTGDNAGLEDNVGGEGEADGARRFALCRLVLNSSENAARAQES
KKDEIYCDCCSAEEEVAVECCEVRKSSGVDVLPSVYSGLKNKLSRIRRDFLVRPGENEKQ
PDKKGMNSQCEQQRPNSLLILLETRCINSPSWSSSSGQHQELVLHSWGPLPLSPWCASPK
YHGPRASNNDKVTNTDPWEQLYPDHPEGTGHRHQVMSDKSLYFSCFEVEISGADIYLGMT
YRSIDQAGSESNSCTLRNNFSWSTLRNGKGFSAWPSDVEMPLKVFGRIGVYPNYPSRTLS
FYRVTCDETTFMHQFDMILLSPSTTTFGF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaccaggagaactgcccccaaacctggggctggagggcagcaccttcactggg
gacaacgctggcctggaggacaacgtcggtggggaaggtgaagcggatggtgcacgcaga
tttgccctgtgcaggctggttttgaacagctctgagaatgcagccagagctcaggagagc
aaaaaagatgagatttactgtgactgctgctcggcggaggaggaggtggctgtggagtgc
tgtgaagtcaggaagagctccggggtggatgttcttcccagcgtttacagcgggctgaag
aacaaactgtctcgaatcaggagggactttcttgtcagacctggagagaatgagaaacag
ccagataaaaagggcatgaactcgcagtgtgagcaacagagaccaaactcgctgctcatc
ttgctcgagacaagatgcatcaactcaccatcctggtcctcatcctccggacaacatcag
gagctggtcctgcacagctggggaccattgcctctgtccccatggtgtgcgagccccaag
taccacggcccacgagccagcaacaacgacaaagtgaccaacactgatccatgggaacag
ctgtacccagatcatcctgaaggaactggacatagacaccaggtgatgtctgacaagagt
ttgtactttagctgttttgaggttgagatatctggggctgacatttaccttggcatgacg
tacagaagcatcgaccaggcaggttcagaaagcaatagctgcaccttgaggaacaacttc
tcctggagcaccctgcggaatgggaaagggttttctgcatggcccagcgatgtggagatg
cccctcaaagtctttggtaggataggggtctacccaaactaccccagcaggaccttgtcc
ttttacagggtcacctgcgatgagacgacctttatgcaccagtttgatatgattttgttg
agcccctctaccacgacttttggcttttaa
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