Rathayibacter tanaceti: GSU10_11580
Help
Entry
GSU10_11580 CDS
T06377
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
rte
Rathayibacter tanaceti
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
CarboxypepD_reg
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QHC56209
LinkDB
All DBs
Position
2465823..2468096
Genome browser
AA seq
757 aa
AA seq
DB search
MAGLRRVGASIDDANDAELLTLVREGRTAATAELWRRHAAAGRTVARAWSSSADPDDLVS
EAFLRVLGAVERGGGPEGAFRPYFFTSIRNVATSWARRGQHERPLDDGDRELAAEGPDPE
EQALAALERDLGARAFKALPARWQEVLWYTEVEGLSPAQAAPLLGLRPNGVAALSLRARE
GLRVAWIREHVVDSAASGECEWVLERAGAHTRGRLPARDRLRLNAHLMDCTSCEDALAEA
ESAGRRLATVLLPLAAGLGGAAAWAGGSAEPASAATASAPPGRGGSHGARANPGAGAGAS
AGAGVGAGAVATAAVAAGLVLVAVVGVAALLPTTPQVSVAVTEEAGTVGPDAEELDPEPE
PGADAPSTDATSVSAPQTTDPAGAASKETAAAEAGGRSNAPSSAAGPSTAGSSEQQRSGG
GTSVSAPFAASALPPTSALPPLPPAPSGPDGGSSGTGADSAPGAVPIAPDTTPVPSPRPS
SRPPAVPTGPRPTTQPPAATPTPAPTAPPAQTTPKPTTPKPTTPKPTPTPSGPAATPTPT
TPRPTGPTPTPQAPAPTAAPTPTPTPGPTAPTPTPAPPTTPPVPVPPTTPPAPPQNEPTT
LILDTDGRLLPDASGTATPGSTVLLEDAETGRRYATATAEADGTWSARALPLPVGTTSVV
ARAGTASTPVEAELRAPSLLAPSSAPAGDVSVLVLTDGGAAGIEILVDGGTVLTDDSGAP
ITSASVPLGPGAHSLGVRYTSPDGRVGPVAESTITVG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggctgggttgcggcgggtgggcgcctccatcgacgacgcgaatgacgctgagctgctc
accctggtccgagagggccgcacggcggcgacagccgaactctggcggcggcacgccgcc
gcgggccgcactgtcgcgcgcgcgtggtcgagcagcgccgaccccgacgacctggtctcg
gaggcgttcctccgcgttctcggcgccgtcgagcgaggcggcgggcccgagggtgcattc
cgcccctacttcttcacgtcgatccgcaacgtcgccacctcgtgggcccgtcgtgggcag
cacgagcgccccctggacgacggcgaccgcgagctcgccgcagaggggccggaccccgag
gagcaggccctcgccgcactcgagcgcgacctcggcgcgcgcgcgttcaaggcgctgccc
gctcgctggcaggaggtgctctggtacacggaggtcgaggggctctcccccgcccaggcc
gccccgctgctcggactgcggccgaacggcgtcgccgcgctgagcctccgggccagggag
ggcctgcgcgtcgcgtggatccgtgagcacgtggtcgattccgcggcgagcggcgagtgc
gagtgggtgctcgaacgagcgggagcacacacccgcgggcgccttcctgcccgtgaccgc
ctgcgtctgaacgcccacctgatggactgcacctcgtgcgaggacgccctcgccgaggcc
gagagcgccgggcggaggctcgccaccgttctgctgccgctggccgcgggcctgggcggc
gcggccgcgtgggccggcgggagcgcggagccggcatcggccgctaccgcgagcgctcct
ccgggccggggaggatcgcacggagctcgcgcgaacccgggcgcaggcgccggagcgagc
gctggcgccggagtcggtgccggggcggtggcgacggcggccgtcgcggcggggctcgtc
ctcgtcgcggtggtcggagtcgcggcactgctgccgaccacgccgcaggtctcggtcgcg
gtgacggaggaggcgggcacggtcggtccggacgccgaggaactcgatcccgagcctgag
cccggagccgatgcaccgtcgaccgacgcgacgtcggtgagcgcaccgcagaccacggat
ccagccggggccgcgtcgaaggagacggcagctgcggaggcgggcggccggagcaacgcg
ccgtcgtccgccgcgggcccctccacggcggggtcctccgagcagcagcggtcgggaggc
ggcacctcggtgtccgcgcccttcgccgcgagcgccctgcctccgacaagcgccctccct
cccctgcctcccgctccctcgggacccgacggtgggtcctccggtaccggtgcggattcc
gcgccgggcgccgtgccgatcgcgccggacaccaccccggtcccgtcgccgcggccgagc
tcgcgccctcccgcggtgccgacaggtccgcgccccacgacgcagcctcccgcggcgact
ccgacgcctgctccgaccgcgcccccggctcagacgacaccgaagcccaccacgccgaag
cccacgaccccgaagcccacacccacaccctccggaccggctgcgacgccgacgccgacg
actccccgaccgaccggaccgacgccgaccccccaggcgcccgcacccaccgccgccccg
actccgacaccgacccccgggccgaccgcacccacccctactcccgcgccgccgacgact
ccaccggttccggtccccccgaccacaccgcctgccccgccgcagaacgagccgacgacg
ctcattctcgacaccgacggccgcctgcttccggacgccagcggcaccgcgaccccgggc
tccacggttctcctcgaggacgccgagaccggacgccgctacgccaccgcgaccgccgag
gcggacggcacctggagcgctcgagccctccctctgccggtcggcacgacctcggtggtg
gcacgcgccggcacggccagcacccccgtcgaggccgagctgcgcgcaccgagcctgctc
gctccctcgtcggcgccagccggggacgtctcggtgctcgtgctgacggacggcggcgcc
gcggggatcgagatccttgtcgacggcgggaccgtactgacggatgacagcggggccccc
atcaccagcgcgtccgtccccctcggccccggcgcccactcgctcggtgtgcgctacacc
tcgccggacggccgcgtgggcccggtcgccgagtccacgatcaccgtcggctga
DBGET
integrated database retrieval system
