Rana temporaria (common frog): 120913106
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Entry
120913106 CDS
T07929
Symbol
HDAC8
Name
(RefSeq) histone deacetylase 8
KO
K11405
histone deacetylase 8 [EC:
3.5.1.98
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120913106 (HDAC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120913106 (HDAC8)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120913106 (HDAC8)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
120913106 (HDAC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
120913106
NCBI-ProteinID:
XP_040178747
LinkDB
All DBs
Position
9:12610100..12637996
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AA seq
369 aa
AA seq
DB search
MEERIPPVYIYSREYATLCDSVQSKVPRRASMVHSLIEAYGLLRHMRVVKPRVATMEEMA
TFHTDSYLEHLRKVSEEGDNDDPETLEYGLGYDCPITEGIYDYAAAVGGATITAVEQLLE
GKARIAINWPGGWHHAKKDEASGFCYLNDAVLGILKLRQKYERVLYIDLDLHHGDGVEDA
FSFTTKVMTVSLHKFSPGFFPGTGDVVDVGLGKGRYYSVNVPLEDGISDVKYYQICESVL
KEVFAAFNPLAVVLQLGADTIAGDPMCSFNMTPEGIGKCLKYVLQWQLPTLLLGGGGYNL
PNTARCWTYLTSVLLGRTLSSEIPDHEFFTDYGPDYVLEITPSCRPDRNDAQKVQEILGS
IKGNLKHVV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagaattcctccggtctacatctacagccgggaatatgcgactctgtgcgac
agtgtgcagagcaaagtgccgagacgggccagtatggtgcactccctgatagaagcctat
ggactcctccgtcacatgagggttgtaaagccgcgggtcgccaccatggaggaaatggcg
actttccacaccgattcctatctggagcaccttcggaaggtcagcgaggaaggtgataac
gatgatccggagactcttgaatatggccttggttatgactgcccaatcactgaaggtatc
tatgattatgcagctgctgtgggaggagccacgataactgcagttgaacagctattggaa
ggcaaagcccgtattgctattaactggccaggagggtggcaccatgctaagaaagacgaa
gcttctggattttgttacctgaacgatgcagtattggggattctgaaactgcgacagaaa
tatgagagagtcctgtatatagatctggatttacatcacggagacggagttgaagatgcg
ttcagtttcaccactaaagtcatgacggtttccctgcacaaattttcaccgggattcttc
cctgggacgggtgatgttgtagacgttggactgggcaaagggcgatactacagtgttaat
gttcctttagaagacggaatatcggatgttaaatattatcagatctgtgaaagtgttctg
aaggaagtgtttgcggcatttaaccctcttgctgttgtcctgcaactgggagccgatacc
attgctggggacccaatgtgcagctttaatatgaccccagagggaattggaaagtgcctg
aagtatgtgttacagtggcagctccctacactcttactcggaggcggaggatataatctc
cccaacaccgcccgttgttggacttatctgacttcagtcttgctaggacggacgttatca
tctgaaatcccagaccacgagttcttcacagattacggtccagattatgttctagagatc
acaccgagctgccggcctgatcgtaatgatgctcagaaagtacaggagatcctggggtca
ataaaaggtaacttgaagcacgtggtttaa
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