Rana temporaria (common frog): 120916990
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Entry
120916990 CDS
T07929
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120916990 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120916990 (USP47)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120916990 (USP47)
Peptidases and inhibitors [BR:
rtem01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120916990 (USP47)
Ubiquitin system [BR:
rtem04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120916990 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
120916990
NCBI-ProteinID:
XP_040183888
LinkDB
All DBs
Position
11:complement(7338828..7416938)
Genome browser
AA seq
1379 aa
AA seq
DB search
MVPGEDGQPVPREGLFWSCRQSIFNEMKKKFSQIENAADEPRVLCIVQDTTNCKTINERI
TLNLPASTTVHQLLKDVAGKVGYVSGTFSLKRGNVGSTEDMTELDSSPDQSLLDAGFEAG
KKNFLHITDRNGEQPQLTSDESGTADSSGLDDSTPEKFIGPLPRDGSVGCTSDYVSQNYS
YSSLLNKSDTGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYKWEFEDPDEDPVTSIPYQ
LQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQAD
LINQLYQGKLKDYVRCLECGYESWRIDTFLDIPLVIRPYGASTAFGSVEEALHAFIQPET
LDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPEEL
DMSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFCTDDALDEGICLESNSSVEKL
NKSSEKSCLYELFSVMVHSGSAAGGHYYACIRSFSDDQWYSFNDQHVSRITQEDIKKTYG
GSTGSRGYYSSAFASSTNAYMLMYRLKNPAKNAKFLEVSEFPEHIMRLMQREKEQEEEEK
RQREIERNTCKLKLFCMHPIKQILMENKLEVHKDKTMKEAVEMAWKIVDLEGVVPLDCCR
LVKYDEFHDYLERSYEDEEDRPMGLLLGGVKSSYMFDLLLETKRPDQVFQSYKPGEVMVK
VYVVDLKGETIVAPVSVRAYLSQTIQEFKQLISKTIDLSWDPMRIVLERCYNDLRLLSVP
SKTLKAEGFFRSNKVFVESSNSTDHQLPFPESHLWKLLDRHANTIRLYVSLPEHAPGPQA
LRSSCTKPCRNSESQAALCERGKADGKSVDAILEESTEKLKSLSLQQQEEGGNGDSSKST
EGSDFENIDSPLNEADSSGSADNRDLENRILPADSENNFQSEERSDSDINNDRSTSSVDS
DILSSSHSSDTLCNADNAPIPLANGLDSHSITSSRRSKANEGKKETWDTAEEDSGTDSEY
DESGKSREETQFVYFKAEMHSGEEGSGDGQKCTFRLLVNVDKRITLSAFKQQLEPFVGVA
SSQFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVFQLLTNDPE
PCKFLLDAVFAKGMSVRQSKEELIPQLREQCVLDLSVDRFRLRKKTWKNPGTVFLDYHVY
ENEISISSNWEVFLEVLEEGEKMKSMSQLSLLTKRWRPSQLKLEPFQEIVLETNSVDELR
EKMCEISGIPLENLEFAKGRGTFPCDISVLEIHQELDWNPKVSTLNAWPLYISDDGAVIF
YRDKTEDLVELTDEQRNQLMKKESSRLQKTGHRVTYSPRKEKALKIYLDGASSKDATQD
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggagaggacggccagcccgtcccccgagaggggttattttggagttgcaga
cagagtatctttaatgaaatgaagaagaaattctcgcagatagagaatgctgccgatgag
ccccgagtgctgtgcatagtccaagacaccaccaactgcaagaccatcaatgaacgcatc
actctgaacctcccggcctccaccaccgtgcaccagctcttgaaggatgtggctggcaaa
gtgggctacgtgagcgggaccttcagcctgaagagggggaatgtaggcagcacggaagac
atgactgagctggattccagcccggatcagtctctactggatgccggctttgaggcgggg
aagaagaatttcctccatataacggataggaacggggagcagccgcagctgacatcggat
gaatcgggcacggcggacagcagcggtctcgatgacagcacgccggagaagttcattgga
cctcttcccagggacggctctgtgggctgcaccagcgactacgtcagtcagaactactcc
tattcatcgctgctcaataaatcagacactggttacgtgggtttagtaaaccaagccatg
acctgctacctgaacagcctgctgcaaacactgtatatgaccccggagttccgcaacgct
ctctacaagtgggagtttgaagatcctgatgaggacccagtgaccagcatcccctaccaa
ctgcagaggctcttcgtcttattacagaccagtaaaaaaagggcgattgaaaccacagac
gtgacgcggagtttcggctgggatagtagtgaagcctggcagcagcatgatgtgcaggag
ctctgtagggtcatgtttgatgctctggagcagaaatggaagcagacggagcaggccgac
ctcatcaatcagctgtatcaggggaagctgaaagattacgttcgatgcttggagtgcggc
tatgagagctggaggatcgacacctttctagacatccctcttgtcatcaggccgtatggc
gccagcacagcgtttggtagtgtggaagaagctcttcatgcgttcatccaacctgagact
ctggacggtcccaaccagtacttctgcgagcgctgtaagaagaagtgcgatgccaggaag
ggcctgcgcttcctgcacttcccatatctgctgactctgcagctgaagaggttcgacttt
gattacaccagcatgcaccgaatcaagctgaacgatcgaatgaccttccccgaggaactg
gacatgagccctttcattgatgttgaagatgagaagtctcctcagacggagagctgcaca
gacagcggagcagagaacgaaggaagctgtcacagcgatcagatgagcaatgacttctgc
actgatgacgccttggatgagggaatctgtctagagagcaacagcagcgtggaaaagctg
aacaagtcctccgagaagagttgtttgtatgaacttttttccgtgatggtccattcaggc
agtgcagcggggggacactactatgcctgcatcaggtccttctctgatgaccagtggtat
agtttcaacgaccagcatgtcagccggataacccaagaggacattaaaaaaacctatgga
gggtctacaggaagccgaggatactactccagtgccttcgccagttctaccaatgcttac
atgctcatgtatcggctgaagaatcctgccaaaaacgcaaaattcctggaggtgagcgaa
tttccggaacacatcatgcgtttgatgcagagagagaaggagcaggaagaagaggagaaa
cgccagcgagagatcgagcggaatacttgtaaattgaagctcttctgcatgcatcccatc
aagcagatcctgatggagaacaagctggaggtacacaaggataagaccatgaaggaggca
gtggagatggcatggaagattgtggatttggaaggggtcgtccctctggattgctgtcgg
ctagtaaaatacgatgaatttcatgactacttggagcgatcgtatgaagacgaggaagat
cggccaatgggattgttgctgggcggggtcaagtcctcctacatgttcgatctgctactg
gaaacgaaacggccggaccaggtgttccagtcctacaaacctggggaggtgatggtgaag
gtgtacgtggtggatctgaagggagagacgatcgtcgcaccggtcagtgttcgcgcttat
ctaagccagacaatccaggagttcaagcagctcatctccaagaccatagacttgtcatgg
gatcctatgcgcatcgttctggaacgctgctacaatgacctacgactgctcagcgtgccc
agtaaaacgctcaaggcagaaggattcttccgaagcaataaggtgtttgtcgagagctcg
aactccacagaccaccagctgccgtttccggagtctcacctgtggaagcttcttgatcgt
cacgctaataccattagactgtacgtgtccctcccagagcacgccccgggccctcaggct
ctgcgctcctcctgcacgaaaccttgcaggaactccgaaagccaggcggcgttgtgcgag
agggggaaagcagacgggaagtccgtggacgccattctggaagaaagcactgaaaaactc
aagtccctgtccctccagcagcaggaggaaggggggaacggggacagcagtaaaagtaca
gagggcagtgactttgaaaacattgactctccgctgaacgaggcggattcctcagggtca
gccgacaacagagacctggagaaccggattctccccgctgactctgagaacaacttccag
tcggaagagcgatcggactctgatattaataatgaccggagcactagttctgtggacagc
gatatccttagctcaagccatagcagcgacaccctgtgcaatgcggacaacgcccccata
ccactagccaacgggctcgactcccacagcatcaccagcagccgcagatccaaagccaac
gaaggcaagaaggagacctgggacacggccgaggaggattccgggacggacagcgagtac
gacgagagcggcaagagccgagaggagacccagtttgtgtatttcaaagcagagatgcat
tctggggaggaaggatctggggatgggcagaaatgtacgtttcgtttattggtgaatgta
gataaaagaatcaccctctctgctttcaaacagcagctggagccttttgtgggcgtggcc
tcctcccagttcaaagtcttccgggtctatgccagcaatcaggagtttgaaagtgtgcgg
ctgaacgaaacgctctcctccttctccgatgacaacaagatcaccatccggctgggaagg
gccttgaagaaaggagagtacagagtgaaggtgttccagctcctaacaaacgaccccgag
ccatgcaagttcctgctggacgcggtgttcgccaaaggcatgagtgtccgacagtccaag
gaagagctgattcctcaactcagggagcagtgtgtcctggacctctccgtggacaggttc
cgattaagaaaaaagacctggaagaaccccggcacagtattcctcgattaccatgtctac
gagaatgagatcagtatttcaagcaactgggaggtcttccttgaggtcctggaagaaggt
gagaagatgaagtctatgtcccagctgtccttgctgacgaagaggtggaggccatcacag
ctaaaactggagcccttccaggagattgtgctggagaccaacagtgtggatgaacttcga
gagaagatgtgtgagatcagcggcataccgctagagaatttggagtttgccaagggtcga
gggacatttccctgtgacatttctgtcctggagatccatcaagagttggactggaaccca
aaagtatcgacactgaacgcctggccgctgtatatatcagacgatggggccgttatattc
tatagggataaaactgaggatctggtggagttaacggacgagcagcgcaaccaactgatg
aaaaaggaaagcagccggttgcaaaaaactggacaccgcgtgacttactccccccgcaag
gaaaaagccctcaaaatctacttggacggagcttcgagtaaagacgccactcaagactga
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integrated database retrieval system
