Rana temporaria (common frog): 120920928
Help
Entry
120920928 CDS
T07929
Symbol
RIN3
Name
(RefSeq) ras and Rab interactor 3 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120920928 (RIN3)
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120920928 (RIN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RA
Collagen
TUG-UBL1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
120920928
NCBI-ProteinID:
XP_040189312
LinkDB
All DBs
Position
13:10426468..10510989
Genome browser
AA seq
1160 aa
AA seq
DB search
MADRNARRGRGASGRARRTSVGVYRSSTDVGVPEVPRCSNPVPNGRPPSSGLSILDRLIK
TCPVWLQLCMSPKQAASILAEEAPGVFLVTRDVEAKCMVLWVHFSDHKNPADVLRYNIRE
EKTMMYLEGSFLIFEDIFKLVGFYCVSRDILQSPLRLPYIISRAQTLKDLETLSNLGSGF
WDSSIRDKRGTLIPHPGKLASCGRLRSGDASDAPSDCACEIELTAGSGRLWFVNPIFIEE
CGNAQACDKLPLTNCVAKAEVQLPKVVYRRPPPPPPPPPLSLHKPPLPSLPPSAPPPDYI
LLHSHSPTLSSPEISSPTPSSFSDQSLISPSQTETPPLPSSGDAPSDETVSQCSSTNAQS
DGPLPLNSALDAPADLSLASSSCSSVAPLVEHLTLCCSSDPSSSEPKLLEPECPPTSVDS
PPAESSSLECKTDVSLSSSAPPNLNQADNSKGSSGIQGSSGIQGSSGIQGSSGIQGSSGI
QGSSAIQGSSAIQGSSAIQGSSAIQGSSAIQGSSAITGSSIIDDHMVEKPSADMRIINSE
EKKDVPVNDVHPGASPIKTPVRLPPAVPKRRPSGKVPETSPNVFSVKPDEEKKLSSPSSE
LKNSVSKAKPMMKPAETQRGSHENLKQKVDSPVHQQKLADGKKMPPPVPPPRVKKLSSKN
SSVTAGQQKPKPKSLVEPQQPSKTSENHQSVKTRDKKGPLKTSTSQDLKGSDSSLNSPVS
GPTTPSSNPEMDSNSTSSADEECDRLAGASLKKSHSFMLDRAKNRLSIVAITNVFSAFMS
ADRKLQKKITELAHDKDSYFGNLVQDYKAYSLEMMAKQSSSTEMLQEIRLMMTQLKSYLV
QSTELKSMVDYNLYTDDKIDAIVEAALCKCVLKPLKAPVERYLREIHEKDDSMRLMTENQ
LVIQDTTTTDLGVTTSVPDSGLMEKITQKFGTMHKTYSPEKKITYLLKACKLIYDSMAAG
NPGKPHGADDFLPVLMYVLARCDLVALLLDVEYMMELMDPSLQLGEGSYYLTTTYGALEH
IKNYDKITVTRQLSLEVQDSIHRWERRRTLNKARVSRSSIQDFITISFEELEVNTRTLAT
KPDTRVAQVLQQCVEKFEVSDPQKYGLFVLINERFYRLADDALPQQVKSRLLKNEEKLDF
HFLYKTAGEQDAPVKDLDFL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggaacgctcgaagggggagaggcgcgtcgggccgcgcccgcaggacgtct
gtcggggtctacagaagctccacagatgtcggagtccccgaggttccgcgttgctccaat
ccggtgccgaacggccgcccgccatcatccggcctcagcattttggaccgactcattaaa
acctgcccggtgtggctgcagctgtgcatgagcccgaagcaagcggcgtccatactcgct
gaagaggcacccggggtcttcctcgtcacccgcgatgtggaagccaagtgtatggtcctc
tgggtccacttctccgatcacaagaaccccgccgatgtccttcgttacaacatccgggaa
gagaaaacaatgatgtatttggagggctccttcctcatcttcgaagatatatttaagctt
gtaggattctattgtgtcagccgagatattttacagtctccactgcggcttccatacatc
atatccagagcccaaaccttgaaggacctggaaactctttccaaccttggttcaggattc
tgggactcctccataagagacaaaagaggcacgctcattcctcatcccggtaaattggcg
tcctgtggccgtttgcggagcggagacgcctccgatgcaccgagtgactgcgcctgtgaa
atcgagctcacggcaggaagcggcagattgtggtttgtgaatcctatttttatcgaggag
tgtggcaacgcacaggcctgtgataaacttccccttacaaactgtgttgcaaaagccgaa
gttcagctccccaaagttgtttacaggagacctcctcctcctcctccaccaccgcctctt
tcgttacataagcctccccttccgtctcttcctccctctgcgcctcccccagattatata
cttctacattcacactcgccaacgttgagttctcctgagatttcctcccctacgccttca
agtttctctgaccaaagtttgatctccccttctcaaaccgagacgccaccactgccttct
tctggtgacgctccttcagatgagacagtttctcaatgttcttcaactaacgcacagtca
gatggacctcttcctctgaattctgctttggacgccccagctgatctgtctctggcttca
tcatcctgttcttctgttgctcctttagtggaacatctcacgttatgttgctctagtgac
ccgtcatcttctgaacctaaactcttagaacctgaatgccctcctacttctgttgattct
ccaccagctgaatcttctagtcttgaatgtaagacggatgtgtccctttcctcatcggct
cctccaaacttaaaccaggcagacaactctaaggggtcttcgggcatccaggggtcttcg
ggcatccaggggtcttcgggcatccaggggtcttcgggcatccaggggtcttcgggcatc
caagggtcttcggccatccaggggtcttcggccatccaggggtcttcggccatccagggg
tcttcggccatccaggggtcttcggccatccaggggtcttctgccatcacaggttcttcc
atcatcgatgatcatatggttgagaagccttctgcagatatgagaatcatcaattcagaa
gagaagaaagacgttccagtaaatgatgtgcatccaggagcatctccaattaagactcct
gttcgcctgccacctgctgtcccgaaaaggagaccttctggtaaagttccagagacttca
cccaacgttttttcagtaaaaccagacgaagagaaaaaactaagttcgccatcttctgag
ctaaagaacagtgtgtcaaaagcgaagccaatgatgaaaccagctgagactcagagagga
agccatgaaaacctcaaacaaaaggtcgactctccggtacatcaacaaaaattggcagac
gggaagaaaatgcctcctcccgtcccaccaccccgagtgaagaaattgtcttctaagaat
tcctctgtcacagctggtcagcaaaaaccgaaaccaaaaagtcttgttgagccccaacaa
ccttccaagacatctgaaaaccaccagagtgtcaaaaccagggataaaaaaggaccacta
aaaacttcgacatcccaagacctgaagggttcagattcgtctttgaattcgccggtgagt
ggaccaactaccccatcatccaatccggagatggattccaactctaccagcagcgccgat
gaggagtgcgacaggctcgccggtgcgtccctcaaaaagtcccattcatttatgctggac
agggccaaaaacaggttgtccatcgtggccatcaccaacgtcttttctgcgtttatgtct
gcagaccggaagctgcagaagaagattacggaactggctcacgacaaagactcgtacttc
gggaatctggtgcaggactataaggcctacagtttggagatgatggccaagcagagctcc
agcacggagatgttgcaggagatacggctcatgatgacccagctgaagagttatctggtt
cagagcaccgagctgaagtccatggtggattataatctatacacggatgataaaatagac
gccatcgtggaggcagctctgtgcaagtgcgtcctgaagccgctcaaggcccccgttgaa
cgttacctccgggagatccacgagaaggacgactcaatgagacttatgacggagaaccag
ctggtcatccaggacaccaccaccaccgacctgggcgtcaccaccagcgtgccagacagc
ggcttgatggagaagattacccagaagtttgggaccatgcacaagacctactctccagag
aagaagatcacctacctgctgaaagcatgcaagctcatctacgactccatggccgctggg
aacccagggaagccccacggagcagatgacttcctcccagttctgatgtatgtcttggcc
cgctgtgacctcgtggctcttctcctggatgtggaatatatgatggagctgatggaccct
tcgctgcagctgggagaaggctcctattacctgaccaccacttacggggctctggagcac
ataaagaactacgataagatcacagtgacccggcagctcagcctggaggtccaagactcc
atccatcgatgggagaggagacgaacgctcaacaaagccagggtgtctcgctcctccata
caggacttcatcacaatctccttcgaagagctggaagtgaacacgaggaccttggccacc
aagccggatacgagggtggcccaggtgctgcagcagtgcgtggagaaatttgaggtgtcc
gacccacagaaatacgggctcttcgtactcatcaacgaacggttttaccgccttgccgac
gacgcattgccgcagcaggtgaaatctcgcctgttgaagaacgaagaaaaattggacttc
cacttcctgtataagacggcgggcgagcaagacgcgccggtgaaggacctggactttctc
tag
DBGET
integrated database retrieval system
