Rana temporaria (common frog): 120927791
Help
Entry
120927791 CDS
T07929
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
rtem
Rana temporaria (common frog)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
120927791
NCBI-ProteinID:
XP_040194639
LinkDB
All DBs
Position
2:468910347..469042956
Genome browser
AA seq
737 aa
AA seq
DB search
MALPQGSVQKIPLLSVILLGLLNFSSGGAYYGMKQLPPQIPQYQQLGQQMHHMPIGKDGT
PLGHMGKEKAHMPHYGKDIPQMPMFGKDMMPRKDGKGNGRELPLSGRRGEQGAPGEPGPR
GPPGPSGPPGQGMPGSKGNPGPPGPSGFPGMGKPGMPGMPGKPGGIGIPGPKGDQGPKGE
GGQTGQPGPHGAPGPSGLSGIGKPGEPGLPGLPGPKGEPGFKGPPGFPGILGPKGDKGVG
VPGLPGLKGPPGLQGPPGQSGLPGIGKPGMNGFHGPKGHQGNPGLQGPPGQEGPVGPPGL
QGPPGIPGVGKPGQDGLPGDIGLPGIKGDQGLPGLPGAPGLPGIGKPGFPGIKGDRGFGG
PPGPMGPKGEKGHIGEPGIGGQPGEPGPAGLPGPMGPPGVAGFPGPKGDRGNGGPDGPTG
QKGEPGIQGLPGKQGFPGEVGPQGLRGLPGPIGPKGEPGHKGFTGSPGQPGLPGPKGEGG
MPGDQGLQGPTGIPGLAGPSGPIGPPGLPGPKGEPGTTGAPGLPGVGKNGIQGPQGPAGQ
PGPVGPTGQRGLPGPPGPPGAPGLPAEIPPTPPGMGQYLPNMGPAIDGVKSYQGYTGKKG
GTVPNHEMPAFTAELTTAFPPVGEPIKFERLLYNGRQGYNPHTGIFTCEIPGIYYFSYHV
HCKGANVWVALYKNNEPLMYTYDEYKKGYLDQASGSAVVPLMLGDKVYIQMPSDQASGLY
AGQYVHSSFSGYLLYPM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaccacaaggttctgtacagaagatccctttactttcagtcatcttgttgggc
ctcctgaatttcagcagtggaggtgcctactatggcatgaagcaattacctccacagata
ccacagtaccagcagctcggacaacagatgcatcatatgccaataggaaaagatggcaca
ccacttgggcacatgggaaaggagaaagcacacatgccacattatggaaaagacattcct
cagatgccaatgtttggcaaagacatgatgccgagaaaagatgggaaaggtaacggacga
gaacttccattatctgggaggagaggagaacaaggcgcacctggtgaacctggaccaaga
ggaccaccaggaccttctggaccaccaggacaaggaatgccaggatcaaaaggaaaccca
ggtccacccggcccatctggatttcctggtatgggaaagccaggaatgccaggcatgcca
ggaaaaccagggggcattggaataccaggtccaaagggagatcaaggacctaaaggagag
ggtggacaaacaggacagccaggaccacatggagcacctgggccttcaggtttatcaggc
attggtaaaccaggcgaacccggtttaccagggcttccagggccaaaaggcgagccagga
tttaaaggaccaccaggatttcccggaattttaggcccaaaaggagataagggagttggg
gtacctggattacctggacttaaaggcccccctggacttcaaggacccccaggccaatct
ggccttcctggcattggtaagccaggtatgaatggcttccatggaccaaaggggcatcaa
ggaaaccctgggttacaagggccaccagggcaggaaggaccagttggtccacccgggctt
cagggtccaccaggaattccaggtgttgggaaaccaggccaagatggtctcccaggtgac
attggattgccaggtattaaaggtgaccaaggacttccaggtttacctggagctcctggt
cttccaggaattggtaagccaggttttcctggaataaaaggagaccgtggatttggtggg
ccacccggacccatgggaccaaagggtgaaaaaggtcatataggtgaaccaggtatagga
ggccaaccaggtgagccagggcctgcaggtctgcctggacctatgggaccaccaggtgtt
gctggttttcctggtcccaaaggagatcgtggcaatgggggccctgatggaccaacagga
caaaaaggtgaaccaggaattcaggggcttccaggtaaacaaggatttccaggtgaggtg
gggcctcaaggtcttagagggttaccaggaccaataggcccaaaaggagaacctggacac
aaaggttttactggatcgcctggtcaacctggattgcctggacccaaaggagaaggtgga
atgcccggtgatcaaggtctccaaggaccaactgggattcctggtcttgccggaccaagt
ggcccaattggacctccaggacttccaggacctaaaggagaaccaggaacaactggggca
cctggtctacctggcgtggggaagaatggtatacaaggaccccaaggtcctgcaggacaa
ccagggccagtagggcctacaggacagcgtggattgccaggtcctcctgggccaccaggt
gcacccggacttcctgcagaaatcccacccacaccaccaggcatgggacagtatttacca
aacatggggcctgcaattgatggagtaaaatcctatcaaggttacacaggaaagaaggga
ggcacggtgcccaatcacgaaatgccagcatttacggctgaactgaccacggccttcccc
ccagtaggagaacctatcaaatttgaaagactgctctataatggtagacaaggctacaat
ccacacactggcatatttacttgtgaaattcctggtatctactacttctcctaccatgtc
cattgcaaaggagccaacgtttgggtggcactctataagaacaatgaaccattaatgtac
acatatgatgaatataagaagggctacctagaccaagcttcaggcagtgcagtggttccc
ctaatgcttggggataaagtatatattcaaatgccctccgatcaagcatctggactctat
gctgggcagtatgttcactcatcattctccggatatttattatatccaatgtga
DBGET
integrated database retrieval system