Rana temporaria (common frog): 120930247
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Entry
120930247 CDS
T07929
Name
(RefSeq) protocadherin gamma-B4-like
KO
K16496
protocadherin gamma subfamily B
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120930247
Cell adhesion molecules [BR:
rtem04515
]
Cadherins
Protocadherins
120930247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
RET_CLD1
Cadherin_3
PKD
Motif
Other DBs
NCBI-GeneID:
120930247
NCBI-ProteinID:
XP_040197405
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Position
3:316416714..316426660
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AA seq
764 aa
AA seq
DB search
MENMARQVIFLYFSFCFVAASDFLHYSVLEEIKQNSVVGNVANDLKLTSNELKMKKLRIV
SNKNMNYFNISSENGNIYIISRIDREELCGSEMNCFLDLEILAENPVNVYPVRIEIQDVN
DNPPSFSKDIFYIGISESTSPGARFVLGNALDQDSGSNSLQSYELSPNTDFELVEKPLSE
EDKYLELILKQQLDREKQQRYRLILTASDGGKPVKTGTAIIQIEVQDVNDNYPVFSQKIY
RIDLNENSAPGSLVIDLNATDEDEGSNAHITYSFSHIRDNARQVFSLDSQTGVIKTIQEL
DYESARSYEATVEAKDGGGLAAQCTVFIQIVDINDNAPEITLASLYTPVPEDSPPGTLVA
LINVKDLDAGKNGEVVCQIRDTQAFKLMASSNNYYKLITARLLDREENPWAILDVNDNPP
MFSKPIYVSYIPEHAPAGTSILNVYASDLDEKENARITYSIINTIIENIPVSSYISMNSM
TGVIYAQRSFDYEQLQELQFQLMAKDSGSPPLSTNVTVRICIIDKNDNAPKILYPSPDNE
DSTIFEFIPNNAEKGYLVTKVIAVDADSGHNAWLSYHLLQVPDPTLINIGQHSGEIRIGR
DLQYTDSLRQKIVVLVKDSGQPSLSSTVTLSLVVAENFQEVVPEIKHTPSNIDISSNATF
YLIIAIVLISVLFIVSVMIVAIFKCKKSTATTLGTYRGNVYPQFTLGCPSEISDTSLPFP
FSYDVCVTLDSKQNEIAYLKPVQNVPTDNLIDTGDSPSENTTQI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagaacatggcacggcaagtaatatttttatatttttccttctgttttgtggctgct
tctgatttccttcattattcagttttagaagagataaagcaaaattctgtagtggggaat
gttgcaaacgatttgaaattaactagcaatgagctaaagatgaaaaaattaaggattgtt
tctaacaaaaatatgaattatttcaatattagttcagaaaatggtaatatatatatcatt
agcagaatagatagggaagagttgtgtgggtcagagatgaattgctttctggatcttgag
attctggcagaaaatccagtaaatgtttatcctgttaggattgagattcaagatgtaaat
gacaatcccccaagtttctctaaggacattttttacattggaataagcgagtccacttcc
ccaggagcccgttttgtcctgggaaatgctcttgaccaggattcaggctcaaattctttg
cagagctatgaacttagtccaaacacagattttgaattagttgaaaaaccactcagtgaa
gaggataaatacctagaacttattttaaagcagcagctagatcgtgaaaaacaacagaga
tatcgtttaattttaacagcttctgatggaggaaagcctgtaaaaactggaactgctatt
atccagattgaggtacaagatgtgaatgacaattatcctgttttcagtcaaaaaatatat
cgaatcgatttgaatgaaaattctgcacctggctcacttgttattgatctaaatgctact
gatgaagatgaaggttcaaatgcgcatatcacatactcatttagtcacattcgtgataat
gcacgtcaggtattttcattagattcccaaactggagtcattaaaactattcaggaattg
gattatgagtcagcaagaagttatgaagctactgttgaagctaaagatggtggaggttta
gctgcacaatgtactgtattcatacagattgtggacattaatgacaatgcacctgagata
actcttgcatccctatatacaccagttccagaggattctccacctgggacacttgtggca
ttaattaatgtcaaagatttagatgctggaaaaaatggggaggtggtatgccaaataaga
gatacccaagcattcaaactgatggcatcatctaataattattacaaacttataactgca
cgacttctggatagagaagaaaacccatgggctattttagatgtgaatgacaacccacct
atgtttagtaaaccaatatatgtatcgtacattccagaacatgcaccagctggaacctca
atacttaatgtttatgcatcagatttggatgagaaggaaaatgctcgtatcacatattca
atcattaacacaattattgaaaacattccagtatcttcatacatttccatgaactcgatg
actggggttatttatgctcagagatcatttgattatgaacaattacaggaattgcagttc
cagctaatggccaaagacagtggctctcctccactaagcactaatgtcacagtaaggata
tgtatcatagataagaatgataatgctccaaagattctttatccatcaccggataatgag
gattctacaatatttgaatttattcctaacaatgccgagaaaggttatctagtgactaaa
gtgattgcagtggatgctgactctgggcataatgcttggctttcttatcatcttttacaa
gttcctgatccaaccttaattaacattggtcaacacagtggtgaaatcaggataggtcga
gaccttcagtatacagattcactgaggcaaaagattgtggtccttgtgaaagacagtgga
caaccctctttgtcctctacagtcaccttgagcttagttgtggctgaaaacttccaggaa
gttgtaccggaaataaaacatacacccagtaacattgacatttcatcaaatgcaacattc
tatctaattatagcaatagttttgatttctgtcttatttattgtgtcggtgatgattgtt
gcaattttcaagtgcaaaaaatctactgcaacaactcttggaacttataggggaaatgtg
taccctcagttcaccctgggatgtccttctgaaatcagcgatacaagtttaccttttcca
ttctcatatgatgtgtgtgtgactcttgactcaaagcagaatgaaattgcttatctgaag
ccagtccagaatgttcctacagataatcttattgacacaggtgattcaccttctgagaac
actacacagatttaa
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