Rana temporaria (common frog): 120930352
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Entry
120930352 CDS
T07929
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03022
Basal transcription factors
rtem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120930352
09124 Replication and repair
03420 Nucleotide excision repair
120930352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120930352
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120930352
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120930352
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120930352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Matrix
Motif
Other DBs
NCBI-GeneID:
120930352
NCBI-ProteinID:
XP_040197484
LinkDB
All DBs
Position
1:complement(106608019..106664080)
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AA seq
401 aa
AA seq
DB search
MADHLKVDEEPEKTKRWEGGYERTWEVLKEDESGSLKSTIDEILFKDKRKRVFENRGQVR
LGMMRHLYVIIDGSRTMEDQDLKPNRLTSTLKLLEYFVDEYFDQNPISQVGLIITRNKRA
EKLTELAGNPRQHITALKKAVDTACSGEPSLYNSLNLAMQTLKHMPGHTSREILVIFSSL
TTCDPSNIYDMIKSLKASKIRVSVIGLSAEVRVCTVLTRETGGVYHIILDESHYKELLMH
HVSPPPANNSSECSLIRMGFPQHTVGSLADQDAKPSFSMAHLDSTSEPGLTLGGYFCPQC
KAKYSELPVECKVCRLTLVSAPHLARSYHHLFPLDAYREVPTREYEGEKYCRGCDGEIKD
LQVYICTVCQCVFCVDCDLFIHDSLHCCPGCTHAQLNPPVV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcatttaaaggtggatgaagaaccagaaaaaaccaagcggtgggaaggtggc
tatgaaagaacatgggaggttctcaaggaagacgagtcaggatccctgaaatccacaata
gatgaaattttatttaaagataaaagaaaaagagtttttgagaatcgtggacaagttaga
cttggtatgatgcgccacttgtatgtgatcattgatgggtcaagaacaatggaagatcag
gatctgaaacctaataggctcacaagcacactgaagctgttggaatattttgtggatgaa
tattttgatcaaaacccaataagtcaggtaggcctcattatcacaagaaataaaagggct
gagaagctgacagagcttgctggtaatcccagacaacacataactgccctgaagaaagct
gtagacacagcgtgcagcggcgagccatctctttacaactccctcaaccttgcaatgcag
acactgaaacacatgcctggccatacaagtcgtgagattctggtgatttttagcagcttg
acaacatgtgatccttctaatatttatgatatgataaagagcctgaaggccagcaaaatt
cgggtgtctgtcataggtctctcagctgaggttcgggtctgcactgtgctcactcgggaa
actggtggcgtttatcatatcatcctggatgagagtcactacaaagagctcttgatgcac
catgtcagcccccctcctgcaaataacagttctgaatgctctctgatacgaatgggtttc
cctcagcataccgtgggttccctggctgatcaagatgcaaaaccttcttttagtatggcg
cacctggatagcactagcgagcctggcctgacattaggaggctacttctgcccacagtgt
aaagcaaagtactctgagctcccagtagaatgcaaagtctgccgccttactttagtgtct
gctccgcacttagcacggtcctaccaccatcttttcccattagatgcttacagagaggtt
cccactagagaatatgaaggggagaagtattgtcgaggttgtgatggagagatcaaagat
ctacaagtttacatttgcacagtgtgtcagtgtgtcttctgtgtggactgtgacctgttt
attcatgattctctgcattgttgtcctggatgcactcacgcacagctaaacccccctgta
gtatga
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