Rothia terrae: IDM49_04595
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Entry
IDM49_04595 CDS
T06818
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rter
Rothia terrae
Pathway
rter03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rter00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IDM49_04595 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rter03021
]
IDM49_04595 (rho)
03019 Messenger RNA biogenesis [BR:
rter03019
]
IDM49_04595 (rho)
Transcription machinery [BR:
rter03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IDM49_04595 (rho)
Messenger RNA biogenesis [BR:
rter03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IDM49_04595 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QNV38544
UniProt:
A0A7H2BFU8
LinkDB
All DBs
Position
995771..997900
Genome browser
AA seq
709 aa
AA seq
DB search
MAESTDQNTGADTTENKTPSLSTLKLAQLQSLASQLGIVGARRMRKSDLVEAITAHQRGS
SVADRPEATASTEASENSSKPARKRSTRKTAADKAQSESAQDNGEQVATEAAAPEAQSEQ
TEQAEKPARKRRNRRASSTGNTVEATSETSENTANTQAEDNKQNAESSEENSSENTNRRT
RSRSDSRRKKTDDSANEAAESSQSEAKKDDASNDESAPNENAEKSERHDKNERGDKNERN
ERRNRRERNNRDDRNNDRRERNNDDKSEKNEKSDRNDKSERNNRDNNGPDDDDRRNRRNR
NRRDRNQERRERRNRRNDNDEPEITEDDVLVPVAGILDVLDNYAFVRTSGWLPGPNDVYV
SLAQVKRYGLRKGDAVVGAIRAPRDGDNQNNSRQKFNALVQLTSINGLSPEESKTRRDFA
KLTPLYPKERLRLETEPKKIGTRVVDLVAPIGKGQRGLIVSPPKAGKTLMLQSIANAITT
NNPEVHLMMVLVDERPEEVTDMKRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVEQG
HDVVVLLDSMTRLGRAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEEGGSLTILA
TALVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIFPAVDVNASGTRREENLLSSEEV
KIMWGLRRVLAGMEQEQALNLLTTKLRDTGSNVEFLLSVQKSQFKGYND
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaatccaccgaccagaacactggtgcggacaccaccgaaaacaagacccctagc
ctgagcaccctgaaacttgctcagctgcagtctctcgcatcgcaacttggcatcgttggc
gcccgccgcatgcgcaagtcagatttggtagaggctattaccgctcaccagcgtggctca
tctgtggctgatcgcccggaggctaccgctagcaccgaagctagcgagaactcctcgaag
cccgctcgtaagcgttccacgcgtaaaactgctgctgataaagcgcagagtgaatcagcg
caggacaatggcgagcaggttgctactgaagcagcagctcccgaggctcagagcgagcag
actgaacaggcagaaaagcccgctcgcaaacgtcgtaaccgtcgtgcaagctcaaccggc
aacacagtagaagctacttctgaaacttcagaaaacactgcgaatacccaggccgaagac
aacaagcagaacgctgagtcctcagaagaaaactcttcagagaacactaaccgtcgcact
cgttcacgttcagacagtcgtcgcaagaagactgacgattcagctaacgaggccgcagaa
tcatcgcagtcagaggctaagaaggacgacgcgtccaacgacgaatcagcgcctaacgaa
aacgctgaaaagagcgagcgtcacgacaagaacgaacgcggcgataagaacgagcgcaac
gagcgtcgtaaccgccgtgagcgcaacaaccgtgatgatcgtaataacgaccgtcgcgag
cgcaacaacgatgacaagagcgagaagaacgaaaagtctgatcgcaacgataagtcggag
cgtaacaaccgcgataacaacggccccgatgacgatgatcgccgcaaccgccgtaaccgc
aaccgtcgtgaccgcaaccaggaacgtcgcgagcgtcgtaaccgccgcaatgacaacgac
gagcccgagattaccgaggacgatgttcttgtaccggtagcgggtatcttggacgtcctg
gacaactacgctttcgtgcgtacttcaggctggctgcccggccccaacgatgtctatgta
tcactggctcaggtcaagcgctacggcctgcgtaagggcgatgctgtagtgggtgctatt
cgcgcacctcgcgatggtgataaccagaacaacagtcgccagaagttcaacgctttggtt
cagctgacctcaatcaacggtttgagccctgaagagtcaaagactcgtcgcgatttcgca
aagctgacccccttgtaccccaaggagcgactgcgtctggaaaccgagcctaagaagatt
ggtactcgcgtggttgacctcgtggctcccattggtaagggtcagcgcggtctgattgtc
tcacctcctaaggcaggtaagactctgatgctgcagtcaatcgcaaacgctatcaccacc
aacaaccccgaggttcacctcatgatggttttggtcgatgagcgtcctgaagaagtgacc
gacatgaagcgcaccgtcaagggcgaagttattgcttcgacctttgaccgtcccgcagaa
gatcacaccactgttgctgaactggctatcgagcgcgctaagcgtctggtagagcagggt
cacgacgttgttgttctgctggattctatgacccgcttgggacgtgcttacaacctcgcg
gcaccggcatcaggacgcatcctctccggtggtgtggactcagcagctctgtacccgccc
aagaagttcttcggcgcagctcgcaacatcgaagaaggcggctcgctcaccattttggca
accgctctggttgagaccggctcaaagatggatgaggtcatcttcgaagagttcaagggc
accggcaacatggagcttcgcctctcacgccagttggctgacaagcgaatcttccccgca
gtcgacgttaacgcatcgggtacccgtcgcgaagagaacctgctgtcttctgaagaagtc
aagattatgtggggtcttcgccgagttctggcgggcatggagcaggagcaggcactgaac
ctgctgactaccaagctccgtgacaccggttcaaacgtagaattcttgctctctgtgcag
aagtcacagttcaagggctacaacgactag
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integrated database retrieval system
