Raoultella terrigena: NCTC13098_06599
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Entry
NCTC13098_06599 CDS
T06046
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
rtg
Raoultella terrigena
Pathway
rtg03030
DNA replication
rtg03430
Mismatch repair
rtg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13098_06599 (holC)
03430 Mismatch repair
NCTC13098_06599 (holC)
03440 Homologous recombination
NCTC13098_06599 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtg03032
]
NCTC13098_06599 (holC)
03400 DNA repair and recombination proteins [BR:
rtg03400
]
NCTC13098_06599 (holC)
Enzymes [BR:
rtg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13098_06599 (holC)
DNA replication proteins [BR:
rtg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13098_06599 (holC)
DNA repair and recombination proteins [BR:
rtg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13098_06599 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
AAA_18
Motif
Other DBs
NCBI-ProteinID:
VDR30164
UniProt:
A0A1V2BJ53
LinkDB
All DBs
Position
1:5514369..5514812
Genome browser
AA seq
147 aa
AA seq
DB search
MKNATFYLLDNDAQQDGLSAVEQLVCEIAAERWRSGKRVLIACEDEQQAVRLDEALWTRP
PESFVPHNLAGEGPRGGAPVEVAWPQKRNSSPRDILISLRVNFADFATAFTEVIDFVPYE
DSLKQLARERYKAYRMAGFNLNTATWK
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgcaaccttttatctgctggacaacgacgcgcagcaggacggcctgagcgcc
gtcgaacagctggtgtgtgaaattgccgcagagcgctggcgcagcggcaagcgcgtgctg
atcgcctgtgaagacgagcagcaggcggttcgcctcgacgaagcgctgtggacgcggcca
ccggagagttttgtcccgcataatctggcgggagaaggccccagaggcggcgcgccggtg
gaggtcgcctggccgcaaaagcgcaacagcagcccgcgggacatcctgatcagtctgcgg
gtaaactttgcagattttgccaccgctttcacagaagtgatagactttgtcccttacgaa
gactctttgaaacaactggcgcgcgaacgctataaagcgtaccgcatggctggtttcaac
ctgaacacggcaacctggaaataa
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