Rhodanobacter thiooxydans: LRK53_09920
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Entry
LRK53_09920 CDS
T08065
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
rth
Rhodanobacter thiooxydans
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
UJJ53316
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Position
complement(2228988..2230058)
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AA seq
356 aa
AA seq
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MSESGRVPVAVAEVYYRGIGNKNLLRQPSLKTMRTDKTAADLADTDRTPPARPARASTRR
QAGQTTGGIVISHPERVVYPDDGITKQQVADYYASVMKWFLPGVAGRPVSVIRCPEGTAK
TCFFQKHMIQGLKHVGSARLKEESGAQASYIYLRDAASVIELVRFGVLEFHPWGATIEQP
DRADRVVFDLDPGNNVGWERVVAAARLVHRLLSQLGLESFLRTTGGKGLHVVVPLNPGCP
WPQVKDFARTFAGTLAQAHPLEFVATASKARRNGLIYVDYLRNSRGATSVASYSLRARPG
APVAMPLRWAELGKLRSGRDFDIRSAPRRLARLRTDPWAGVDTLRQNLDQVIKKFG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagtccgggcgtgtaccggtcgcggtggccgaggtgtactaccgcggcatcggc
aacaagaacctgttgcgccaaccgagcctgaagaccatgcgtaccgacaagaccgcggcg
gacctggccgataccgatcgcaccccgcctgcccgccctgccagggcctccacacgccgc
caggctggccagaccaccggcggcatcgtcatcagccatcccgagcgcgtggtgtatccc
gacgacggcatcaccaagcagcaggtggccgattactacgccagtgtaatgaagtggttc
ctgcccggcgtggcgggccgtccggtgtcggtgatccgttgtccggaaggcacggcgaaa
acctgcttcttccagaagcacatgatccagggtctgaagcacgtcggcagcgcgaggctg
aaggaagagtccggcgcccaggccagctacatctacctgcgcgacgccgcctcggtgatc
gagctggtgcggttcggcgtgctggagttccatccctggggcgcgaccatcgagcagccc
gaccgtgccgaccgcgtggtgttcgatctcgaccccggcaacaacgtgggctgggagcgc
gtggtggccgcggcacggctggtgcatcggctgctgtcgcagctgggtttggaatcattc
ctgcgcaccaccggcggcaagggcctgcacgtggtggtgccgctgaatcccggctgcccc
tggccgcaggtgaaggatttcgcgcggacgttcgccggcacgctggcgcaggcccatccg
ctggagttcgtcgccaccgccagcaaggcccgccgcaatggcctgatctacgtggattac
ctgcgcaacagccgtggcgcgaccagcgtggcgtcgtactcgctgcgcgcgcgccccggc
gcgccggtcgccatgccgctgcgttgggccgagctgggcaagctgagaagcggccgcgat
ttcgacatccgctccgcgcccaggcgcctggcgcgcttgcgcaccgacccgtgggcgggc
gtggacacgctgcgccagaacctcgaccaggtaatcaagaagttcggctga
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