Rufibacter tibetensis: DC20_07170
Help
Entry
DC20_07170 CDS
T04099
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rti02000
]
DC20_07170
Transporters [BR:
rti02000
]
Other transporters
Pores ion channels [TC:
1
]
DC20_07170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
TonB_dep_Rec
Plug
CarboxypepD_reg
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
ALI98794
UniProt:
A0A0P0C656
LinkDB
All DBs
Position
1831736..1834807
Genome browser
AA seq
1023 aa
AA seq
DB search
MKNKLLTFLLLHLCGVAFAQSTITGRVTSARGGEPLPGVSVVVKGTTAGSTTDVDGRYQL
QAPANAGTLVVSYIGFVNQELPINGRTTIDVTLQEDQQALEEVVVVGYGTQQKSLVTGAI
SSVKAEEIATVSSSRVEQALQGRTAGVTVLPASGSPGAGMRVRVRGTGSNANSEPLYIVD
GVRAGGIEYLDPSEIASIEVLKDAASAAIYGAEGANGVVIITTKTGKPNSSEVSYNFQYG
RQSVGRLMPMMNAQQYQQYLQESNSPGRPTAAEAAAVGEGTNWFEEVFQSAPQQHHSLSF
SGGSDKSTFLVSGNYFTQEGILGGDKARFNRYTVRINTDHKIKSWLTIGEKFSYSNFNRR
GVAENDEFGGLISSALSLDPLTPVIYTGALPAHVTAAINAGRPLVRDENGNYYGISNFIR
GEYGNPLARISLARGQTTQNKVVGNLYANFDILPGLKFTTQFGVDGAFQRQHNWTPTFWF
SSESQNSVANGSDSQNNWFTMQWENYATYQKQFGDHGFTFLAGTSAVKRMWNYIGGSYSG
LFKEEERFSYADTTPDNLDRIGSNSNASTLASYYGRLSYDFAGKYLLNATVRRDGSSLFA
PERAWGTFPSLSLGWVVSNEDFFPSTRINHLKLRASWGQNGSLSAARIGDWVSAVTVIGR
YPDASGNYLVGAAPTTLPNRDLTWETSEQLDFGLDLALFNNRLTFTADFFNKDTKDLITP
GVAPGFVGASLPFVNGGNVRNRGWEFELGYRNDAAKGFQYEVSGNITTIKNEVTYLNPNV
SEIPGASVGTGWSATVFKEGFPIWYLRGYKTDGIFQTQEEISQYLARTGITGYSPKPGDP
IVVDTNGDKQISPADYAMIGNPHPDVIFGARVNLAYKGFDILAFVQGQLGNDVILGFSRT
DRPTANKPAFFFEDRWTGPGSTNTGFAPTTTNAYVYNSDLMVFDGSYARVRQLQFGYTLP
NALTSRLKVKNARMYVSLDNYFTFTDYPGLDPEAGSNSANSLGIDRGTYPVPRLAMFGLN
FNF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaactactcacttttctactcttacacttgtgtggagtagcatttgctcag
tccacaattaccggccgggtaacctcggctcgtggcggagagcccctaccaggcgtgagc
gtggtagtaaaaggtaccaccgcaggtagtaccacagacgtggatggtagataccaattg
caagcccctgctaatgccggcaccctggtggttagctacatcgggtttgtaaaccaggag
ttgcccatcaatggacgcaccacaatagatgtcactctacaggaagatcaacaggccttg
gaagaagtagtggtggttggatacggtacccagcagaagagtttggtaacgggcgcaatc
tcctccgtgaaagctgaggaaattgccacggtatcttccagccgggtagaacaggccctc
cagggccgtacagccggcgttaccgtattacccgcttccggttcaccaggtgctggcatg
cgcgtacgggtaagaggtacgggttccaatgccaactcagagcctctgtacattgtagac
ggagttagagcaggcggtattgaataccttgacccttcagaaattgcctctattgaagta
ctgaaagatgcagcatctgccgccatctacggagcagaaggtgctaacggggttgtgatc
atcactaccaaaacagggaagccaaactcatcagaggttagctacaacttccaatacggc
agacagtctgtaggcagattaatgccgatgatgaacgcccaacagtaccagcaatacctg
caagagtctaactctccgggcaggccaaccgctgctgaggctgctgccgtaggcgaaggc
accaactggtttgaagaagttttccaatcagcgccacaacaacaccattctttaagcttt
agcggaggttctgataaatcaaccttcttagtaagtggtaactacttcacccaggaaggt
attctgggcggcgacaaagcaagatttaaccgctacaccgtccgcatcaacacagaccac
aaaatcaaatcttggttgaccattggcgagaaattctcttactctaacttcaaccgcaga
ggtgttgccgaaaatgatgaatttggtggtttgatcagtagtgcgctttcccttgatcct
ctgactcctgttatctacacaggtgctcttccggcgcacgtaaccgctgctattaacgcg
ggtcgtccattggtgcgtgatgaaaacggaaactactatggtatctctaacttcatcaga
ggtgaatatggtaacccattggccagaatctccttggccagaggccagactacgcaaaac
aaggtggtaggtaacctgtatgccaactttgacattctgccaggcctgaagttcaccacc
cagtttggggtggacggagcattccaaagacagcataactggactcccaccttctggttc
tccagtgaaagccagaactcagttgcgaacggttcagactcccagaacaactggtttacc
atgcagtgggaaaactatgctacctaccaaaaacaatttggtgaccatggcttcaccttc
ttagccggtacttctgctgtgaagcggatgtggaattacattggaggaagctattctggc
ctcttcaaagaggaagaaagattctcttacgcagacaccacgccagacaaccttgacaga
attggtagtaactccaatgcgagcaccctggcctcttattacggaaggctttcttatgac
ttcgcgggcaagtatctattgaacgccacggtaagaagagatggttcttctctgtttgct
cctgaaagagcatggggcacgttcccatcgttgtctttaggctgggtggtgtctaacgaa
gatttcttcccaagcaccagaatcaaccacttgaaactacgtgccagctggggccagaac
ggctctctatccgctgcccgtattggggactgggtatcagcagtaacggtaataggccgt
tatccagatgcttctggtaattacctggtgggcgctgcccctactaccttacccaaccgt
gaccttacctgggaaaccagtgagcagttagacttcgggcttgatttagccttgttcaac
aaccgcctgacctttaccgctgactttttcaacaaagacacgaaagacctgatcacgcca
ggtgttgcgccgggctttgtgggggcttctcttccatttgtgaacggtggtaacgttaga
aacagaggctgggagtttgaattgggttaccgcaatgatgctgctaaaggcttccagtac
gaagtttctggtaacatcactaccatcaaaaacgaggtaacgtacctgaaccccaacgta
agtgaaattccgggtgctagtgtaggcacaggctggtctgctactgtattcaaagaaggt
ttccctatctggtacctgagaggctataaaacagatggcatcttccagacccaggaggaa
atcagccaatacttagcaaggactggcatcaccggctatagcccaaaaccaggtgatcct
attgtggtagacaccaacggtgacaagcaaatttcaccagcagattacgctatgattggt
aacccacatccagacgtaatctttggtgcccgcgtgaaccttgcctacaaagggtttgat
atattagccttcgtacaaggtcagttgggcaatgacgtgatcctgggcttcagccgtact
gaccgtcctaccgccaacaagcctgctttcttctttgaagaccgctggactggcccagga
agcaccaacaccgggtttgccccaaccactaccaacgcctatgtctacaacagtgactta
atggtgtttgatggttcttatgcccgtgttcgccagctacaatttggttatacccttcca
aacgccctaaccagcagacttaaagtgaaaaacgccagaatgtatgtgtctcttgacaac
tacttcaccttcactgactaccctggcttagacccagaggcaggaagtaacagcgccaac
agcttagggattgaccgtggtacctacccggttccaagactagccatgtttggtttaaat
tttaacttttaa
DBGET
integrated database retrieval system
