Rufibacter tibetensis: DC20_13870
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Entry
DC20_13870 CDS
T04099
Name
(GenBank) TetR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rti03000
]
DC20_13870
Transcription factors [BR:
rti03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
DC20_13870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_27
TetR_C_4
TetR_C_29
DUF503
TetR_C_5
DUF4121
DUF4363
Motif
Other DBs
NCBI-ProteinID:
ALI99860
UniProt:
A0A0P0CYR9
LinkDB
All DBs
Position
complement(3382331..3382897)
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AA seq
188 aa
AA seq
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MTRKEQIDQVATSLFKSRGFAATTMRDLALELGIEAGSLYSHIKSKEDILQRVCFKMADE
FNAAFDEVQHQDVPAGEKLRLAVAAHVRVLTKNPPAAGVFLNEWRHLSEPSLSKFHDMRF
KYEESLRQIVRDGIASGEFKVTDEKFVVLTLLSSLNWLHMWYKPEGKMSPDEIAEFLSNL
LLNGLKNF
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgacccggaaagaacagatagaccaagtagccacttccctatttaaatcaaggggtttt
gccgccaccaccatgcgcgaccttgcgctggaacttggaattgaagccggaagcctctat
tcacatatcaaatctaaggaagacattctgcagcgggtctgtttcaagatggccgatgag
tttaacgctgcctttgacgaggtacagcaccaggacgtacccgccggcgaaaagctacgt
ttagctgttgccgcgcacgtgcgggtattaactaaaaacccgccggcagcgggcgtgttc
ctgaacgaatggcgtcatttaagtgagccttcactgagtaaattccatgacatgcggttc
aagtatgaggaaagtcttcgtcagattgtgcgggatggcatcgccagcggcgagtttaaa
gtgaccgatgaaaagtttgtggtgcttaccctgctttctagcttaaactggctgcacatg
tggtacaagccggaaggtaaaatgagcccagacgagattgccgagttcctttctaatctc
ttgcttaacgggcttaaaaacttctaa
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