Ruminococcus torques: RTO_10110
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Entry
RTO_10110 CDS
T02606
Name
(GenBank) Uncharacterised Sugar-binding Domain.
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
rto
Ruminococcus torques
Pathway
rto00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RTO_10110
Enzymes [BR:
rto01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
RTO_10110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hyd_65N_2
Glyco_hydro_95_C
CHB_HEX_C_1
FIVAR
Fn3_assoc
Motif
Other DBs
NCBI-ProteinID:
CBL25699
UniProt:
D4M387
LinkDB
All DBs
Position
complement(1004755..1009668)
Genome browser
AA seq
1637 aa
AA seq
DB search
MRRRLKKLIGITTAAAMAVSLVPTTVFAEEPVAAIAEETAKNDNLLRVWYDEPATDWQTQ
SLAIGNGYMGSLVFGGINKDKIHINEKTVWEGGPTSYNGYSYGTTNKTETDADLQKIKDD
LNAIREKLDDKSEYVFGFNEDSYEASGTNTKGEAMDWLNKLMGDLVGYSAPKDYANLYIS
NNQDSSKVSNYVRDLDMRTALATVNYDYEGVHYTREYFDSYPDNVMAVRLSADQKGKINF
DTNLQSLIGGRTHKSTVDGDTITMRDALGGNGLNIEAQLKVINEGGSLSSNTNGSNPSIT
VSDADAVTLIFACGTDYKMELPSFRGEDPHDAVTARINAAAKKGYEALKKDHVADHDALF
SRMELGFNEEVPTIPTDELIKKYRNMVDNNGGEVPTESEQRALEVICYQFGRYLTIAGSR
EGALPTNLQGVWGEGYFQWGGDYHFNINVQMNYWPTLASNLAECQTAYNDYLNVLKEAGR
YAAAAAFGIKSDEGEENGWLVGCFSTPYMFSALGQKNNAAGWNPIGSAWALLNAYEYYLY
TEDTDYLKNELYPSLKEVANFWNEALYWSEYQQRYVSAPSYSPENGPIVNGASYDQQFIW
QHFENTIQAAETLGVDADLVEQWKEKQSKLDPVLVGDDGQVKEWYEETHFGKAQAGDLGE
IDIPQWRQSLGAQSGGVQPPHRHLSHLMALYPCNMISKDNPEFMDAAIVSLNERGLDATG
WSKAHKLNLWARTGHSDEAFQIVQSAVGGGNSGFLTNLLSSHGGGANYKGYPIFQIDGNF
GYTAGVNEMLLQSQLGYVQFLPAIPEQWNTGHVEGIVARGNFEINMNWSEGKADRFEIKS
RNGNTFTGEYENIAAYAVKKSDGTKVETTAITDNKISFPTEAGETYTIDFNSTPEKLQGV
INQAKDLLDKMGGKVLDVQKAHLVELIQAAEKVVEEEKSDEYYDNTQILLKAIKVGEAAI
ELRDSCSEAEEVYEGRDVNEDWASYVNTAADLDNQLDAAVELLKDTECTVTELNLMKKSV
DEAKDALLGIWDKLTVTIKPMDKEMLGANDKIAISSEFDDLQIRYTIDGNEPTWFSEEYT
EPFAMTRSKETVKAALFLGRRQMSEVASAEYISKEALNVEDSIEKTYTSVTDNGTSGDSD
GLAGALDGKHNGTAWQLQNIPAELELQFAEPVEVNAAEVALDNYYPDYIDIKDMDIEYWD
GNEWVAAVKGASIGGQSRVFLFDSFKSDKVKLRINKAWLYDYYHSFGWYTSIDAFRLFNL
NDVITTDKSSLDMVISVAQKNIDDGEVDAAIESVRESFTAVFNYAKDVSANVQSSQAVID
NTAIALIEEIQKLGFKAGDKTQLQSHYNLYSALNLDLYIDGEEKDAFVEALENAKAVIED
GDAMEADVVAADQKLVDAAEALVKKGDKTSLQKLVDSTADYKKENYLSAGWNTFEVALDA
AKKVLADESATQEDVDKAKEVLTSAMTALRYKADKSVLEEIIGKAKAMDLTGYSAENVAL
FNVALAKAEAVMANEELSVYEQPIVDAAVLDLQNAMKALNDEKDNASKPSDPSKPSNPSK
PGSGNGNGATGSDKNNGSGSDGKHQATTAGKQNGGNTVSGTNGKATKTGDVTPIIPAAAG
VILSMAAIVVVLKKRKR
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaggttaaaaaaacttatcggaattacaacagctgcagcaatggctgtttcg
ttagttccgacaaccgtttttgcagaggaaccggtggcggctatcgcagaagaaactgca
aagaatgataatcttttgagagtctggtatgatgaaccggcaacagattggcagacgcag
tcattagcaatcggaaatggctatatgggaagtcttgtattcggcggcattaataaagac
aagatccatattaatgaaaaaactgtctgggaaggtggaccgacaagttataatggctat
agctatggtacaacaaacaaaacagagacagatgcagatcttcagaaaatcaaagatgat
ctgaatgcgatccgtgagaaattggatgataaatcagagtatgtctttggatttaatgaa
gattcctatgaggcaagtggaaccaatacaaaaggtgaggcaatggattggttgaacaag
ctcatgggagatttggtaggatacagcgcaccgaaggattatgcaaacctgtatatctcc
aataatcaggattcatcaaaagtgtccaattatgtcagagatctagatatgcgtacagcc
ttggcaactgtaaactatgattatgaaggggttcattatacaagagaatactttgacagt
tacccggataatgtaatggcagtacgtctgagcgcagaccagaaaggaaagatcaacttt
gatacaaatcttcagagtctgatcggaggaagaactcataagagtacagttgacggtgac
acaatcacaatgcgtgatgcattaggcggaaacggattgaacattgaagcacagttgaag
gttatcaacgagggaggaagcctttcttcaaatacaaatggttcaaatccatccatcact
gtatctgacgcagatgcagttacattgatctttgcatgtggtacagactacaagatggag
cttccgagttttcgtggagaggatccacatgacgcggttacagcaagaatcaatgcagca
gcgaaaaaaggatacgaagcactgaaaaaagatcatgtagcagatcatgatgcattgttc
tcccgtatggaattaggattcaacgaagaagttccgacaattcctacagatgaactgatc
aagaagtaccgcaacatggtagataacaatggcggtgaagttccgacagaatccgagcag
agagctctagaagtaatctgttaccagtttggacgttatctgacaatcgccggatctaga
gaaggcgctcttccgacaaaccttcagggtgtttggggagaaggatatttccagtggggt
ggagactaccacttcaatatcaacgttcagatgaactactggccaacactggcaagtaac
cttgcagaatgtcagacagcatacaatgattacctgaatgttctgaaagaagcgggacgt
tatgcggcagctgcagcctttggtatcaagagcgatgagggcgaagaaaacggatggctc
gtaggatgcttcagtacaccatatatgttctcagcacttggacagaagaacaatgcagcc
ggatggaacccgatcggttctgcatgggcacttctgaatgcatatgagtactatctgtac
acagaagatacagattacctgaaaaacgaactgtacccatctctgaaagaagttgcaaac
ttctggaatgaggctctttactggagtgagtatcagcagcgttatgtatcagctccttct
tactcaccggagaacggaccaatcgtaaacggtgcatcatacgaccagcagtttatctgg
cagcactttgagaatacgattcaggcagcagagacattaggcgttgatgcagatctggtt
gaacagtggaaagaaaaacagtccaaactggatccagtcttagttggtgacgacggacag
gtaaaagagtggtatgaagaaacacatttcggaaaagcacaggcaggagatcttggtgag
attgatatcccacagtggagacagagtcttggagcacagagtggaggagtacagccaccg
caccgtcatctgtcacatctgatggcattatatccatgtaatatgatcagcaaagacaat
ccggagtttatggatgcagcaatcgtatccctgaacgaaagaggtctggatgcaacagga
tggtcaaaggcacacaaactgaacctttgggcacgtacaggacattctgatgaggcgttt
cagatcgtacagtctgcagttggtggtggaaactcaggattcctgacaaatcttctctca
tcacacggtggaggagcaaactacaaaggatacccgatcttccagatcgatggtaacttt
ggttatacagcaggtgtaaatgagatgcttcttcagagccagctcggttatgttcagttc
ctgccggcaatcccagagcagtggaacacaggacatgtagaaggtatcgttgcaagaggc
aactttgaaatcaatatgaactggtcggaaggtaaagcagatcgtttcgagattaaatca
agaaatggaaatacatttacaggtgaatacgagaatatcgcagcttatgcagtaaagaaa
tctgatggaacaaaagtagagacaacagctatcacagacaacaagatttccttcccgaca
gaggcgggagaaacttacacaatcgacttcaactcaactcctgagaaacttcagggcgta
atcaatcaggcgaaagatcttctggataaaatgggaggtaaagttcttgatgtacagaaa
gcacatcttgtggaactaatccaggcagcagagaaggttgtagaagaagagaaatcagat
gagtattatgataatacacagatccttctcaaagcaatcaaggttggagaagcagcaatc
gaattaagagattcctgcagtgaagcagaagaagtatatgaaggaagagacgtaaacgaa
gattgggcaagctatgttaatacagcagcagatctggataaccagttagatgcagcagta
gaacttctgaaggatacagaatgtacagttactgagctgaatctgatgaagaagagcgtt
gatgaagcaaaagatgcacttcttggaatttgggataaattgacagtaacaattaaacca
atggataaggaaatgctcggagcaaacgacaagattgcgatttccagcgagtttgatgat
cttcagatcagatatacgatcgatggaaatgagccaacatggttctcagaggaatataca
gaaccatttgcaatgacaagatccaaagaaacagtaaaagcagcattgttccttggaaga
cgtcagatgagtgaagtagcttcagcggaatatatcagcaaggaagcattaaatgtagaa
gacagcattgaaaaaacttatacttcagttacagataacggaacatccggagacagtgac
ggtttagcaggtgcgcttgatggaaaacataatggtacagcttggcagctgcagaatatc
ccggcagagcttgaacttcagtttgcagagcctgtagaagtaaatgcggcagaagtggca
ttagacaattactatccggattatattgatatcaaagatatggatatcgaatactgggat
ggaaacgaatgggttgcagcagtcaaaggagcatctatcggtggacagtccagagtattc
ttattcgatagttttaagtctgataaggttaaacttagaattaataaagcatggctctat
gattattatcatagctttgggtggtatacaagcattgatgcattccgtctgttcaatctg
aatgatgtaataacaacagacaagagttcattagatatggtaatttccgtagcacagaaa
aatatagatgacggagaagtagatgcagctatcgagagcgtaagagaaagctttacagca
gtatttaactatgcgaaagatgtaagtgctaatgttcagtcaagccaggcagtaatcgac
aatacagcaatcgcattgatcgaagaaatccagaagcttggattcaaggctggagataag
acacagcttcagagtcattacaatttatacagtgcattaaatctggatctgtacattgat
ggagaagagaaagatgcatttgtggaagcacttgagaatgcgaaagcagtgattgaagat
ggtgatgcaatggaggcagatgttgtagcagcagaccagaaacttgttgatgcagcagaa
gcacttgttaagaagggagataagacatctcttcagaaactggtagattccacagctgat
tataagaaagagaattatctcagcgcaggatggaatacattcgaagtagcacttgatgca
gcgaagaaagtacttgcagatgagtctgcaacacaggaagacgtagacaaggcaaaagaa
gttcttacatcagcaatgacagcacttcgttacaaagcagacaagtccgtactggaagag
atcattggaaaagcaaaagcaatggatctgaccggatacagcgcagaaaatgttgcactg
ttcaatgtggctcttgctaaagcagaagcagttatggcaaacgaggaactttctgtttac
gaacagccaatcgttgacgcagcagttcttgatctgcagaacgcaatgaaagctctgaat
gatgagaaagataatgcatcaaaaccatccgacccatcaaaaccgtcgaacccatcaaaa
ccgggaagtggaaatggaaacggtgctacaggatctgacaagaataatggatcaggttct
gatggaaaacatcaggcaacaacagcaggtaagcagaatggcggaaacacagtgagcgga
acaaacggaaaagcaactaagacaggtgatgttacaccgatcattccggcggcagcaggt
gttattctttcaatggcagcaattgttgttgtactgaaaaaaagaaaaagataa
DBGET
integrated database retrieval system
