Rhincodon typus (whale shark): 109910400
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Entry
109910400 CDS
T06055
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
rtp04145
Phagosome
rtp04218
Cellular senescence
rtp04514
Cell adhesion molecules
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109910400
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109910400
04145 Phagosome
109910400
09143 Cell growth and death
04218 Cellular senescence
109910400
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109910400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109910400
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
109910400
Exosome [BR:
rtp04147
]
Exosomal proteins
Proteins found in most exosomes
109910400
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
Antigens
109910400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
I-set
Ig_2
C2-set_2
Motif
Other DBs
NCBI-GeneID:
109910400
NCBI-ProteinID:
XP_020365160
LinkDB
All DBs
Position
35:6202873..6208850
Genome browser
AA seq
342 aa
AA seq
DB search
MLLTVFSISLCFSWVSPDCKSRTTIFTIISGIQDYPEVTATGMLNGVQIAYFDSNNQRSL
PRQQFMAESLDKKFWDEDTDLTITHTRLLKENLKAIMEMTNQTSGIHTVQWIRSVEVSDD
GSMKRSMRFGFDGKDFISLEPDRMRWVASNHFAVKLKEKWDSDKSWNNYWETYLQETYVD
HLNIYFQAGNEYLKRKVQPEVFISRSEPNRQDKPLTLSCLVTGFYPVDIEVTWLRDGEVM
SETQSSGIRPNHDGTHQTQKEIEISAGDEDQYSCQIEHSSLSEAKLYQWGIPENSVDCSH
LVIVIGLVTAMAVICGIIIWKRPWRDSPSGTYTTARTSDVCS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgaccgttttctccatttccctgtgtttttcctgggtctctcccgactgtaag
tcacgcacaacgattttcacaataatctcaggaatacaggattatcctgaggtcactgct
actggaatgctcaacggagtccaaatagcttattttgatagtaataaccaacgcagtctc
cccaggcagcagttcatggctgaatctctcgataagaaattctgggatgaagacacagat
ctgacaatcacacatactaggcttctaaaggagaatctgaaagcaatcatggaaatgaca
aaccagacatcaggaattcacactgtccaatggatacgttctgttgaggtcagtgatgac
ggttccatgaagagatcgatgagatttggatttgatggaaaggatttcattagtttagag
ccagacagaatgagatgggtcgcatcaaatcactttgcagtgaagctgaaggagaaatgg
gattctgataaatcctggaacaactactgggaaacatacctccaagaaacttatgttgat
catttgaatatatattttcaagcaggaaatgaatatctcaaaagaaaagttcagcctgaa
gtgttcatctccaggagtgaacccaatcgtcaggataagccgctcactctctcctgcctg
gtcactggattttatcctgtagacatcgaggtgacctggctaagggatggagaggtcatg
tctgagacacaatcctcggggattcgaccgaaccatgatgggacccatcagacccagaaa
gagatagaaatcagtgctggggatgaggatcaatattcctgtcaaattgaacacagcagc
ctgtcagaggccaagctctatcagtggggaatccccgaaaacagtgtggactgttcccat
cttgtaattgtgattggattagtcactgcaatggctgtaatatgcggaataatcatctgg
aaaagaccatggagagattcaccaagtgggacctacacaacagctcgcacttctgatgtc
tgctcatga
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