Rhincodon typus (whale shark): 109910924
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Entry
109910924 CDS
T06055
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109910924 (slc1a1)
Transporters [BR:
rtp02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
109910924 (slc1a1)
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GFIT
Motif
Pfam:
SDF
CDC48_2
DUF3094
Motif
Other DBs
NCBI-GeneID:
109910924
NCBI-ProteinID:
XP_048450360
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Position
3:14089792..14212730
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AA seq
522 aa
AA seq
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MLRFLKTTKRYHFTASLRKNWLLMCTILAVVLGILIGVLARNYAALSNLDKFYFGFPGEI
LVRMLKLIILPLIVSSIITGIAALDSDVSGKVGMRAVIYYFSTTIIAVILGIVLVMSIKP
GVSQNAEEIDRSGSSPEVTTVDAMLDLLRNAFPENLVQASFQQYKSKRIEIEPTNNATSP
MVTVVMTTQTNETKSKDYKVVGGYTDGINVLGLIVFCLVFGIVIGQMGEKGKILLDFFDA
LNEATMRIVRIVMWYMPIGILFLIAAKVMGVDDWEIFRRLGLYMATVLTGLAIHGGIILP
IIYFIVVRKNPFIFIGGMAEALLTSVMISSSSATLPVTFRCAEDKNKVDKRITRFVLPVG
ATINMDGTALYEAVAAIFIAQLNDYPLDAGQIITISITATAASIGAAGVPQAGMVTMVIV
LTAVGLPPHDITLIMAVDWLLDRFRTMVNVLGDSFGAGIVEKLSSRELQQMDLTSGINVV
HPFALEPAASEKEETKIKETYINGAFDVDKTDSVAVTETSQF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgctttctgaaaaccacaaaaagatatcattttacagctagtttgaggaagaac
tggctgctcatgtgcacaattctcgccgtcgtcttaggtattctgatcggcgttctggca
cgtaactatgctgctttgtcaaacctagacaaattttactttgggtttcctggagagatc
ctcgtgagaatgctgaagctgatcattttacctttaattgtctccagtataattacagga
atcgctgcgttggattcagatgtgtctgggaaagttggaatgcgggcagtgatatattat
ttttcaaccactataattgctgtaattctaggaattgtgttggtgatgagcattaaacct
ggtgtctcccaaaatgctgaagaaattgacaggagtggaagttcgccagaggtcaccact
gtagatgccatgctagatcttctcaggaatgcattcccagaaaacttggtacaggctagc
tttcaacagtataaaagcaaacgaatagaaattgaacctacaaacaatgctaccagcccg
atggttactgttgtcatgacaacacaaacgaatgagactaagagcaaagactacaaagtg
gttggtggatacactgatggaataaatgtactgggcctcattgtcttctgcctagtattt
gggattgtcattggacagatgggcgaaaaaggcaaaatcctgctagacttctttgatgca
ttgaatgaagccaccatgagaattgtacgcattgtcatgtggtatatgccaataggtata
ttatttcttattgctgctaaagtaatgggagtggatgactgggaaattttccgtaggctt
ggcctttatatggcaacagtgctgactggattagccatccatggtggtattattctcccc
ataatctatttcattgtggtacggaaaaatcccttcatattcattggaggaatggctgag
gcattactgacttctgtcatgatttcatccagttctgcaactctgccagtaacattccga
tgtgctgaggacaaaaacaaagttgacaaaaggatcaccagatttgtgttgccagtgggt
gccacaataaacatggatggaacagctctatatgaagcagttgctgcaatatttattgct
cagcttaatgactatccattggatgcggggcaaataatcaccatcagcattacagcaaca
gcagctagcattggagcagcaggggttcctcaagctgggatggttaccatggtgattgtt
cttaccgcagttggattgcctcctcatgacatcactctgatcatggctgtagattggcta
ctggatcggtttcggacaatggtgaatgtacttggagactcttttggagctggaattgtg
gagaagctgtccagtagggaactgcagcaaatggatctcacgagtggcatcaatgtagtg
catccatttgctctggaacctgctgcatctgagaaggaggaaaccaagataaaggaaaca
tatatcaatggagcatttgatgtagacaaaacggactcggtagctgtcacagaaacatca
caattttga
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