Rhincodon typus (whale shark): 109914004
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Entry
109914004 CDS
T06055
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rtp01100
Metabolic pathways
Module
rtp_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
109914004
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109914004
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
109914004
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
109914004
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
O-Glycan
109914004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
109914004
NCBI-ProteinID:
XP_020369160
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All DBs
Position
7:97832830..97845353
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AA seq
612 aa
AA seq
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MYIVTHGDERPIWNMYQTVKYIFEHFSSEYDWFFLIQDDSYTESDRIKRLVNHLSINTDL
YMGRPQEFIGGDVDGRYCHGGFGFLLSRSLLIKLQPHLETCRNDILSSRPDEWLGRCIID
YVSVSCVSEYETLHYRYFELGKNSELEKEEAPQFRNAFTVHPVVDPVQMYRLHKRYTELE
LEKTYREIEDLQDEIRNVSGLTAEGEKFSSWPVGINPPFEPHTRFEVLRWDYFTEEQLFS
CADGSPKCELRGIDKADVSNIIETAVEELNKKYLPILQLQKEQLVNGYRRFDPTRGMEYT
LDLQLQVITQKGHSRSITKRVYLVRPLSNIEIIPMPYVTEATRVHIILPISVHEREQAIR
FIEQYAVNTLESNENAILTLLFIYDPFEAQRVNQNDIFSSVKAKIMDCERKYPESKIPWI
SVKTDSPCQLKIMDVISKKHPVDTLFFVAGINMEVNFEFLNRCRMNTINQWQVFFPIHFQ
EYNPEVAYHNQPLPLTIDLLKDSGHFDRDFFDAACFYNSDYMAARGRMASDVLENEEILE
TLDLYEMFVRYSNLHVFRAVEPGLRQKYNQRMCNPRVSEEIYHHCVQSNIQALGSRSQLA
VLLFEQEQGNST
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtacattgtaacccacggtgacgagcggccgatctggaacatgtaccagacagtaaag
tatatctttgagcatttcagcagtgagtacgactggttcttcctcatccaggatgattcc
tacactgagagtgatcgcatcaaacgtctagtgaaccacctcagcatcaacactgacctg
tacatgggccgtccccaggagtttattggtggtgatgtagatggtcggtattgtcacggt
ggatttgggttcctgctgtcccgcagtctcctcatcaaattgcaaccgcatttggaaacc
tgtcggaatgacatcctcagctccaggcctgacgagtggctgggtcgatgcatcattgat
tatgtgtcagtcagttgtgtcagtgagtatgagactctgcactaccgatactttgaactc
gggaagaatagcgagctggaaaaggaggaggctccacagttccggaatgctttcaccgtc
catccggtcgtggaccctgtccagatgtatcggctacacaaacgttacactgagctggag
ctggagaaaacttaccgagagattgaagatctccaggatgaaatccggaatgtcagtggg
ctaacggctgagggggagaagttcagcagttggccagtggggattaaccctcctttcgag
ccccatactcggttcgaggtcctgcgctgggattatttcactgaggagcagctcttctcg
tgtgctgatggctcaccaaagtgcgagctgcgagggatcgacaaggcagatgtcagcaac
atcatcgaaacggctgtggaggaactgaacaagaagtacctgcccatcctgcagctgcag
aaggagcagctggtgaatggttaccgtaggtttgaccctacaaggggcatggaatatacc
ctggacctccagctacaggtgattacccagaaaggccacagtcgctccatcaccaagaga
gtgtacctggtccggcctctcagcaacatcgagatcatacccatgccctatgtgaccgag
gccaccagggtccacatcatcctgcccatcagcgtccacgagagggagcaggccattcgt
ttcatcgagcagtacgctgtcaacacgctggagagtaacgagaatgccatcctcactctc
ctcttcatctatgacccctttgaagctcagagggtcaatcagaacgacatcttcagcagt
gtcaaagccaagatcatggactgtgagaggaaatacccagaatcaaagattccctggatt
agtgtgaagactgactcaccctgccagctgaaaatcatggacgtcatctccaagaagcac
ccagtcgacaccttgttttttgtggctggcatcaacatggaagtgaactttgagttcctc
aaccgctgtcgcatgaacaccatcaaccaatggcaagtcttctttcccatccatttccag
gaatataacccagaggtggcctatcacaaccagcccctgccgctcaccattgacctgctg
aaggattccggccactttgaccgtgacttcttcgatgctgcctgtttctacaactcagac
tacatggccgcgcgtgggagaatggcgtccgatgtcctggagaatgaggagatcctggag
acgctggacctgtacgagatgtttgtgagatactccaacctccatgtcttccgcgctgtg
gagcccggcttgaggcagaaatacaaccagcggatgtgtaacccgcgagtaagcgaggag
atctatcaccattgcgtgcagagtaatatccaagcactgggctcacgctcccagctcgcg
gtgctgctgtttgagcaggagcaaggcaatagcacctga
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