Rhincodon typus (whale shark): 109914453
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Entry
109914453 CDS
T06055
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109914453 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109914453 (abcb4)
04147 Exosome [BR:
rtp04147
]
109914453 (abcb4)
04090 CD molecules [BR:
rtp04090
]
109914453 (abcb4)
Enzymes [BR:
rtp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
109914453 (abcb4)
Transporters [BR:
rtp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109914453 (abcb4)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109914453 (abcb4)
CD molecules [BR:
rtp04090
]
Proteins
109914453 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
AAA
Rad17
AAA_5
AAA_28
AAA_30
AAA_7
AAA_29
AAA_14
DUF815
G-alpha
SbcC_Walker_B
AAA_24
APS_kinase
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
109914453
NCBI-ProteinID:
XP_048468124
LinkDB
All DBs
Position
2:44775786..44873203
Genome browser
AA seq
1277 aa
AA seq
DB search
MPNQYMKGSTNETDNKEDDVPTDGKVEKNSETKEKEKKPKMVSPLALFRYASCADRLLMV
LGSVAAIIHGAGMPLMVIVFGQMTDSFVQNEILKNLTANELLNISTAASETLEEQMTRFS
YYYVGLGAAVLLAAYVQVSFWSLAAARQTQKIRETFFHSLLRQEIGWFDVIQIGELNTRL
TDDISKISDGIGDKIGFLIQSLASFIGGFMVGFIKGWKLALVILAVSPVLGISAAIWSKL
LTSFTKQEQNAYAKAGAVAEEALSGFRTVVAFGGQKKEVARYQEKLIEAEKVGIKKLISS
NVAVAFTFLIIYASYALAFWYGSTLILTENYTIGKVLTVFFSVLIGAFSIGQTSPNIEAL
GNARGAAYVIFNILDQEPLIDSFSENGHKPDQVKGDVEFINVRFKYPSRPDVEILKGLHL
KLKSGQTVALVGSSGCGKSTTIQLLQRFYDPEEGMIMLDGQDIRSLNVRHLREMIGVVSQ
EPVLFATTIAENIRYGRQNVSMTEIEEATKEANAYGFIMKLPDKFETLVGERGTQLSGGQ
KQRIAIARALVRNPKILLLDEATSALDAESEATVQAALDKVRKGRTTIVVAHRLSTVQNA
DIIAGLQDGVISEMGTHEELMKAKGIYHALVTAQTFRHEDNETDKLAIERNEAEPKTVAA
KPLRRQSTRASMKKPGTATENKDADVPQDENLPNMSFLRILRMNKTEWPYILLGTFSSII
NGVLQPAFALIFSKIVAVFANTNKEHIRCQSTLFSLLFLALGGVSFITFFLQGFTFGKSG
EILTMRLRYSAFKAMMRQDVSWFDDSKNSTGALTTRLATDASQVKGATGIRLGLISQNVA
NLGCSVIISFVYGWQLTLLILAIVPILALAGLIQMRMFTGHANKDKLELEKAGKIAAEAV
ENIRTVVALTRERKFEEMYEENMKIPSRNSIKKAHVYGVTSAISQAILYFAYAACFRFGA
WLVTNNYMVFRDVFLVFSAIVFGAMALGQTSSFAPDYAKAKVSAAHIRMLLDQTPSIDSY
SESGHVPASFEGIVKFEDVGFNYPTRPDVIVLQGLTLSVGKGQTLALVGNSGCGKSTTVQ
LLERYYDPLHGRVLLDEHDVKDLNVQWARAQMGIVSQEPVLFDCSIAENIAYGDNSRVVS
QEEIEVAAKAANIHAFIETLPQKYSTCVGDKGTQLSGGQKQRVAIARALVRNPKILLLDE
ATSALDTESEMIVQEALDKARKGRTCIVIAHRLSTIQNASKIVVFSNGRIAEEGTHHQLL
AKQGLYYNLVTAQMRKN
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaccaatatatgaaaggaagcacgaacgagaccgacaacaaagaagatgatgtt
cctactgatggaaaagttgagaaaaacagtgaaacaaaagaaaaggagaagaagcctaaa
atggtcagcccactggctttgtttcgctatgcaagttgtgcagacagacttctaatggtg
cttggtagtgttgctgctataattcatggagctggcatgcctctcatggtcatagtattt
gggcagatgacagacagcttcgtccagaatgaaattttgaaaaacctaacagcaaatgaa
cttcttaatataagtactgctgcatcagagactctagaagaacagatgacaagattttcc
tattactacgtgggtttaggggcagctgttctgcttgctgcctatgtccaagtttccttc
tggtcactcgctgcagcaagacagacacaaaagataagagaaactttttttcattcatta
ttgcggcaggaaataggatggtttgatgtcattcagattggcgaactcaacacccgtcta
acagatgatatttcaaagataagtgatggaattggcgataaaataggcttcctcatacaa
tcactggcctcctttataggtggctttatggttggctttatcaaaggatggaaactagca
ctggtgattctggctgtgagtccggttctaggaatttctgcagcaatctggtccaagttg
ttgacttccttcacaaaacaagaacaaaatgcttatgcaaaagctggagctgtggctgag
gaggcattgtcaggtttcaggactgtagtagcttttggaggacaaaagaaagaagttgca
aggtatcaggagaaattgattgaagctgagaaagttggaatcaaaaagttaattagcagc
aatgtagcggtggctttcaccttcttaatcatctatgcatcgtatgctctggcattctgg
tatggaagtaccctgatactgactgagaattatacaattggaaaagtgctaacagtgttc
ttttcagtgctgattggtgcgttttctatcggccagacttcaccaaacattgaagcgctc
ggcaatgcaaggggagcagcttatgtgatcttcaacatcttggatcaggaaccattaatt
gatagtttttcagaaaatggacataaacctgatcaagtcaaaggagacgtggaatttata
aatgtacgcttcaaatacccttcaaggcctgatgttgagatattaaaaggtctgcacctg
aagttgaaaagcgggcaaacagttgctctggttggcagcagcggctgcggtaagagtact
accatccaacttctgcagagattctatgaccctgaagaaggaatgattatgcttgatgga
caggatatccgaagtttgaatgttagacatctcagggaaatgattggtgttgtgagccag
gaacctgtcctctttgcaaccacaatagctgaaaacattcgctatggtcgtcaaaatgtc
agcatgactgagatagaagaagctaccaaggaagctaatgcctatggttttattatgaaa
ctgccagataaatttgaaacgttagttggagaaagaggcacacagctgagcggaggccag
aagcaaagaattgctattgcacgtgctctggtgcgcaatcccaagattctgctgctggat
gaagctacatctgctttggatgctgagagtgaagctactgttcaagctgctctcgataag
gtacgcaaaggccgcactactatagttgttgctcaccgtctgtcaacagtccaaaatgca
gacatcattgcaggtttacaggatggtgtcatttcagagatgggaacccatgaagaactg
atgaaggcaaaaggaatttatcatgcattggtgactgcgcagacatttaggcatgaagac
aatgagacggacaaattggctattgagagaaatgaagctgaacccaagactgttgctgca
aagccactgcgaagacagtcaacacgtgctagcatgaaaaagccaggaacagctacagaa
aataaggatgctgatgttccacaggatgaaaatcttcccaacatgtcctttctgcgtatc
cttagaatgaacaagactgaatggccttatatacttctgggaacattctcttccattata
aatggtgtcctgcagcctgcatttgctctcatattttccaaaattgttgctgtatttgct
aatacaaacaaagaacatattcgctgtcagagtacacttttttccctgttattcctagca
cttggaggtgtctccttcatcacattttttctacaaggtttcacatttggcaaatctgga
gagatactgacaatgagactccgatattcagcctttaaggcaatgatgcgacaggatgtt
agctggttcgatgattcaaagaacagcactggagcattgactaccagacttgctactgat
gcatctcaagttaagggggctacgggtatcagacttggtttgatttcacagaatgtagct
aatttaggatgttcagttattatttccttcgtctatggctggcagctgacactattgatc
ttggctattgtgccaatcttggcattagcaggattgatacaaatgagaatgttcactgga
catgccaacaaggacaagttggaacttgagaaagcaggaaagattgctgcggaggcagtc
gaaaacattagaaccgttgtagctctaacaagggaaagaaagtttgaagaaatgtatgaa
gaaaacatgaaaattccttccaggaattcaataaagaaggctcatgtttatggagtcacc
tctgcaatttcacaagcgattctctactttgcttatgcagcatgttttcgatttggggcc
tggctggtgacaaataattacatggttttccgggatgttttccttgtattctcagcaatt
gtatttggagctatggctttggggcagacaagctcatttgcacctgactatgcaaaggcc
aaggtctcagcagctcacatcagaatgctgcttgatcaaacaccatctatagacagctac
agtgaaagtggtcatgttcctgcatcttttgaaggaatagtgaagttcgaagatgttggc
tttaactatcctactcgacctgatgtgatagtgttgcaaggtttgacgctttcagttggg
aagggacaaaccttagctctagtgggtaacagtggctgtgggaaaagcaccaccgtacag
ctgctagagaggtactatgacccactacatggaagagtgcttttagatgagcatgatgtg
aaggatctcaatgttcagtgggctcgggcacagatgggtattgtgtcccaggaacctgtt
ttgtttgactgcagtattgctgagaacattgcctatggagacaacagcagagttgtatcc
caggaggagatagaggttgcagccaaagcagcaaacatacatgcgtttattgaaactctg
cctcagaaatacagtacgtgtgtaggagacaagggcacccagctgtctggaggtcagaaa
cagcgtgttgccattgctcgagccttagtccgaaatcccaagatcctcctcttggatgaa
gctacttcagcactggatactgaaagtgaaatgattgtccaagaagcactggacaaagca
agaaagggacgtacctgcattgttatagctcatcgtctgtcaaccatccagaatgccagt
aaaatagtagtgtttagtaatggccggattgcagaggaaggaacacatcatcagcttctt
gctaagcaaggtctatactacaatctagtgactgcacaaatgagaaaaaactga
DBGET
integrated database retrieval system
