Rhincodon typus (whale shark): 109917144
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Entry
109917144 CDS
T06055
Symbol
pcgf5b
Name
(RefSeq) polycomb group RING finger protein 5-B
KO
K11489
polycomb group RING finger protein 5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109917144 (pcgf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109917144 (pcgf5b)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
109917144 (pcgf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-Nse
zf-RING_5
zf-RING_10
Actin_micro
zf-RING_6
zf-rbx1
TRAF3_RING
zf-C3HC4_5
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
109917144
NCBI-ProteinID:
XP_048464952
LinkDB
All DBs
Position
20:13295314..13441291
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AA seq
235 aa
AA seq
DB search
MATQRKYLVREFNAFITCYICKGYLIKPTTVTECLHTFCKSCIVQHFEDTNDCPKCGIQV
HETNPLEMLRLDNTLEEIIFKLVPGLKEMEKRQEEEFWKKNKPQENGEDNEGPKAKKAKI
EEEEDQEDQDYHRSDPQIAICLDCLRNNGQSGDNTVKGLMKKFIRCSTRVTVGTIKKFLS
LKLKLPSTCELDVLCNGEIMGKDHTMEFIYMTRWRLRAENSYPMVLQYRPRIDFG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggctactcaaaggaaatacctagtgagagaatttaatgccttcatcacttgttacatc
tgcaagggctatctaatcaagccaactacagtgactgagtgtctacacactttttgcaaa
agttgtattgttcaacattttgaagacacaaatgactgtccaaaatgtggaattcaagtt
catgaaactaatcctttggaaatgttaaggttggacaatacgctcgaagaaattatattt
aagttggtgcctggtcttaaggaaatggaaaagcggcaagaagaagaattctggaaaaaa
aataaaccacaagagaatggagaagataatgaaggccccaaagccaaaaaagctaaaata
gaagaggaagaggaccaagaagatcaagattatcatagaagtgatccacagattgccatt
tgcctagattgccttcgcaacaatggccaatcaggagataatactgtaaagggcttaatg
aagaaatttattcgctgctcaacaagagtcacagttggaactataaaaaaatttctgagt
ttgaaattaaaacttcctagcacttgtgagcttgatgttctatgcaatggggaaattatg
gggaaggatcatacaatggaattcatatatatgactagatggagactcagagctgaaaat
tcttatccaatggtactacagtatcggccaaggattgactttggttag
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