Rhincodon typus (whale shark): 109922037
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Entry
109922037 CDS
T06055
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109922037 (rbfox1)
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109922037 (rbfox1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
SPESP1
Motif
Other DBs
NCBI-GeneID:
109922037
NCBI-ProteinID:
XP_048465444
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All DBs
Position
21:31402063..31641738
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AA seq
372 aa
AA seq
DB search
MEEKGRKMVQQGNQEATAPPDTMAQPYASAQFAPPQNGIPTEYTAPHPHPAPDYTGQTTV
PEHTLNMYPTAQTHSEQSGTDTNAQTVSGTATQTDDAAQTDGQQQTQSTENTDNKTQPKR
LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHG
TVVEGRKIEVNNATARVMTNKKTVNPYANGWKLNPVVGAVYSPEFYAVPGFPYPAATAAA
AYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYTAYRYAQPATAT
AAAYSDSYGRVYAADPYHHALAPAATYGVGAVNAFAPLTDAKTRSLADDVGLVLSSLQAS
IYRGGYSRFAPY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaagggagaaagatggtgcagcagggtaaccaggaagccactgcaccccct
gacactatggcgcagccttatgcgtcagctcagtttgctccacctcagaatgggatcccg
acagaatacacagctccacatccccatccagctccggactacacaggccagaccacagtc
cctgagcacacgttaaacatgtaccctactgcccagacacattcagaacagagcggtacc
gacacaaatgcacaaaccgtgtccggaacagctacacagacagatgatgcagcgcagact
gatggacagcaacaaacacaatctactgaaaacacagataacaaaacacaacccaaacgg
ctccatgtctccaatattccattcagattccgagacccagacctcaggcaaatgtttggc
caatttggtaaaatcttagatgttgagataatttttaatgaaagagggtctaagggattt
ggtttcgtaactttcgaaaatagtgctgatgcggacagggcgagggagaaattacacggc
acggtggtagagggccgtaaaatagaggttaataatgctacagcacgtgtcatgacaaac
aaaaagaccgtcaacccttatgcaaatggatggaaattaaatccagttgtgggtgcagta
tacagtcctgaattctatgcagttcctggcttcccttacccagccgccactgcagctgct
gcttaccgaggggcacacctgaggggtcgaggacgtacggtttataacacattccgtgct
gctgcaccacctccgcccataccagcctacggcggtgttgtttaccaagatggattttat
ggtgcagacatttatggtgggtacactgcctacaggtatgcccaacctgccactgccact
gctgcagcctacagcgacagttacggaagagtttatgctgcagacccctaccaccacgca
cttgctccagcagccacctacggcgttggtgccgtgaatgcttttgcacccttgactgat
gccaagactaggagccttgctgatgatgtcggtctcgttctttcttcattgcaggctagt
atataccgagggggatacagccgttttgctccatactaa
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