Rhincodon typus (whale shark): 109923465
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Entry
109923465 CDS
T06055
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109923465 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109923465 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109923465 (shha)
Peptidases and inhibitors [BR:
rtp01002
]
Cysteine peptidases
Family C46: hedgehog family
109923465 (shha)
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Morphogens
109923465 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Hint_2
Motif
Other DBs
NCBI-GeneID:
109923465
NCBI-ProteinID:
XP_020379084
LinkDB
All DBs
Position
2:complement(17967459..17982802)
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AA seq
418 aa
AA seq
DB search
MMLTRIVFVGLICCCLVSPVKACGPGRGYGRRRHPRKLTPLGYKQYIPNVAEKTLGASGR
YEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGVK
LRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAHI
HCSVKAENSVAAKSGGCFPASARVSLENGSTKAVKDLRAGDRVLAADSEGRLFYTDFIMF
LDRAREATKVFHVIETRQPRRKLSLTAAHLLFAGLRRRSPGQPQFRATFASNVKPGHLVY
VPDGDGQRLRAATVQKVYLEEMEGAYAPLTDQGTLVVNQVLASCYAVIEDHALAHWAFLP
VRMSYAAKSLFSLSDPFTANSTVPEDGVHWYSNALYQIGRWVLNEASIHPLGMTLDSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgacgagaattgtgttcgtgggattgatttgctgttgtctcgtctcgcctgtg
aaagcttgtggacctggccggggctacgggcggaggagacacccccgaaaactaacccca
ctcggctacaagcaatacatccccaacgtggcagagaagacgctgggggcaagtggcaga
tacgaaggcaagattaccaggaactcggagaggttcaaagaattgacacccaattacaat
ccggacattatttttaaggacgaagagaacacgggggccgacagactgatgacacagagg
tgtaaagacaaattgaattccctggcgatctcagtgatgaaccaatggcccggggtgaag
ctcagggtgacagagggctgggacgaagacggccatcactcggaggagtcgctgcattac
gagggcagagcagtggacattaccacctcggaccgtgacaggagcaagtacggcatgttg
gccaggctggcggtggaggcgggcttcgactgggtctactacgaatccaaggcccacatt
cactgttcggtcaaagcagaaaactcagttgctgcaaagtccggaggctgctttccagct
tcagctcgcgtgagcctggagaacggttccacgaaagcggtgaaggatctgagagcggga
gaccgtgtgctggcggcggacagtgaaggcaggctgttctacaccgactttatcatgttc
ctggacagagcccgggaggccaccaaggttttccacgtgatcgagacgcggcagccccgg
aggaagctgtcccttactgcggctcacttgctgttcgccgggttgcggcggcggagcccg
ggacagccccagttccgggccactttcgccagcaacgtgaaacccgggcatctggtctac
gtgccggacggagacggccagcggctgcgggctgccaccgttcagaaggtttatttggag
gagatggaaggggcttacgccccactgactgaccagggcaccctcgtggtcaaccaggtc
ctggcctcttgctatgccgtgatagaggatcacgcactggcccactgggcgttcttgccg
gttagaatgagttacgcggccaagtccttattttcactcagtgacccattcacagccaac
agtactgtcccggaagacggcgtccactggtactccaacgccttgtatcaaataggcaga
tgggttttgaacgaggcatccattcacccactgggaatgacattggactccagctga
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