Rhincodon typus (whale shark): 109931731
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Entry
109931731 CDS
T06055
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X2
KO
K14946
RNA binding protein fox-1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109931731
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109931731
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
109931731
NCBI-ProteinID:
XP_020386585
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All DBs
Position
37:20461391..20692277
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AA seq
369 aa
AA seq
DB search
MERKTMVSQGSQEPAATPDAMVQPYATVPFPPPPPPPPQNGIPTEYTVPHTQDYTGQTPV
PEHTLNIYASSQTLGEQSGTIANVQPVSGTATQTDEAAQTDGQQQTQSTESSESKPIPKR
LHVSNIPFRFRDPDLRQMFGQFGKIIDVEIIFNERGSKGFGFVTFESSADADRAREKLHG
TVVEGRKIEVNNATARVMTNKKMVSPYANGWKLSPVVGAVYSPEFYAGPASLSSLPFHLH
PVASTALSPTHNVPGFPYQAATTAAALRGALRGRGRAVYSAFRAAAPPAAIPAYGGVVYQ
DGFYGADLYGGYAAYRYAQPATATATAYSDSYGRVYTADPYHTLAPAPTYGVSAVASLYR
GGYSRFAPY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaagacgatggtttcacagggtagccaggagccagcagccaccccagatgct
atggtacagccgtacgctacagttccattccctccccctcctcctccaccacctcagaat
ggaattccaacagaatacactgttccacacactcaggactacacaggccagacgccagtc
ccagagcacactctgaatatctacgcatccagtcagactcttggggagcagagtggcaca
attgccaatgtgcagcctgtatctggaactgccacacaaacagatgaagcagcacagaca
gacgggcaacaacaaacacagagtacggagagcagtgagagcaaacccatccctaaacgg
ctccatgtttccaacattcccttccggttccgcgatcctgatctcaggcaaatgtttggg
caatttggtaaaatcatagatgtagaaattatatttaatgagcgtggctcaaagggattc
gggttcgtaactttcgaatctagtgctgatgccgacagggcgagggagaaattacacggc
acggtggttgagggccgtaaaatagaggtaaacaatgccacagctcgagtgatgactaat
aagaagatggtcagcccttatgcaaatggctggaagctgagccctgtggttggtgctgtc
tacagccctgaattttatgcaggtcctgcatctttatcatctttaccctttcacctacac
cctgttgcctctacagcactcagcccaacacacaatgttcctggtttcccatatcaagca
gccaccaccgcagctgcattgagaggtgccctgagaggacggggtcgtgcagtctacagt
gcattccgtgcagcagcgccccctgccgccattccggcctacggaggtgtggtttaccag
gatggattttatggtgccgatctctatggtggatatgcagcctacaggtatgcacagcca
gcaactgctacagccactgcatacagtgacagctatgggcgtgtttacactgcggacccc
tatcacacactcgctcctgctcccacctacggagttagcgctgtggctagtttataccga
ggtggatacagccgtttcgctccctactga
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