Rhincodon typus (whale shark): 109933401
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Entry
109933401 CDS
T06055
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109933401 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109933401 (usp47)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109933401 (usp47)
Peptidases and inhibitors [BR:
rtp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109933401 (usp47)
Ubiquitin system [BR:
rtp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109933401 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
109933401
NCBI-ProteinID:
XP_048462955
LinkDB
All DBs
Position
17:35303547..35404374
Genome browser
AA seq
756 aa
AA seq
DB search
MVPSEENQLLPTEGMFWSCRQSIFDEMKKKLSQSETAADEPRVLCIVQDTTNAKAVTQRL
TLNLPASTPLKRLFDDVASKAGYVTGTFELVWTNGLNKADQSPLDYSSEKSLADSGFEPG
KKNFLHLTDKDGEQPQFASDESGTAESSGHDDSAQERIIGPQLRENTVGCGEYNSQNYSY
SPVLGKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYRWEFEEYEEDPVISIPYQL
QRLFVLLQTSKKRAVETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVKCLECGYESWRIDTYLDIPLVIRPYGSNLAFNSVEEALQAFVQPETL
DGPNQYFCERCKKKCDARKGLKFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPAELD
MSPFIDVEEEKSPQTESCTDSGAENEGSCHSDQMINDFSNDDVVDEGICLENNSGGEKSL
KAGNEKGAWIYELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSRITPDDIRKTY
GGSTVTRGYYSSAFASSTNAYMLIYRQKESTRNAKFLEVHEFPEHIKHLVQKEKETEEQE
KRQREIERNTCKIKLFCMHPVRQVMMENKLEVHKDKTLQEAVEIAYKLMDLEDAVPIDCC
RLVKYDEFHDYLERSYEGEEDTPVGLLLGGVKSSYMFDLLLETRQPNQTFQPYKSGEVMV
KVHVVDLKLGTLLPPISIRAYLNQTVTEFKQLISQC
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagtgaggagaaccaactgctacccacagagggaatgttctggagttgcaga
caaagtatctttgatgaaatgaagaagaagttatctcagtcagagactgcagcagatgaa
ccacgggtgctgtgcattgttcaggacaccaccaatgccaaggcagttactcagcggctc
accctaaatcttcctgcatccactccgctcaaacggctgttcgatgatgtagcatctaaa
gcgggttacgttactggcacctttgaattagtctggaccaatggtctgaacaaagctgac
cagagtcccctggattactctagtgaaaaatctcttgctgattctggatttgaaccagga
aagaaaaattttcttcatctcacagataaagatggcgaacaaccccagtttgcatcggat
gagtctggtacagcagaaagcagtggacatgatgacagtgctcaggaaaggattattggc
cctcagctaagggaaaacactgtgggttgtggagagtacaatagtcagaactactcttac
tctcctgtcctgggaaagtcagaaactggatatgttggattggtgaaccaagctatgacc
tgctacctgaacagcttgctgcagacactcttcatgacccctgaatttaggaatgcactg
tacaggtgggagtttgaagaatatgaagaagatccagtgatcagcattccttatcaactc
caaaggttgtttgtcttgttacaaactagtaagaaaagagcagtggaaacaacagatgtg
actcgaagctttggctgggatagcagtgaagcatggcagcagcatgatgttcaagaattg
tgcagggttatgtttgatgcattggagcagaaatggaagcaaactgaacaggctgacctc
atcaaccaactgtaccaaggaaaattgaaggattacgtcaagtgtctggagtgtggctat
gagagctggagaattgatacataccttgatatcccactagttatcagaccatatggttcc
aacctggcatttaacagtgtggaagaggccttgcaagcatttgttcagcctgaaaccttg
gacggccccaaccagtatttctgtgaacgctgcaagaaaaaatgtgatgcacgcaagggg
ctaaagtttctacacttcccatacctactgacactgcaactgaagcgctttgactttgac
tataccacaatgcacaggattaagctgaatgaccgaatgacctttccagctgagctcgac
atgagtcctttcatagatgtggaagaggagaaatctcctcagactgagagctgcacagac
agtggtgctgagaacgaaggaagttgccacagtgaccagatgatcaatgacttctcaaat
gatgatgttgtggatgaaggaatatgcctggagaataacagtggaggtgaaaaatcctta
aaggcagggaatgaaaagggtgcctggatttatgagctcttctcggttatggttcactca
gggagtgctgctggtggacattactatgcctgtattaaatcattcagtgatggacagtgg
tacagttttaatgaccagcatgttagcaggattactccagatgatattaggaagacgtat
ggtggctctacagtaaccagaggatattactccagtgcttttgccagctccaccaacgcg
tatatgttaatttacagacaaaaagaatctacaagaaatgcaaagttcttggaggtccat
gaatttcctgagcacatcaagcatctagtccagaaggagaaagaaacagaagaacaagaa
aaaaggcagcgggaaattgaacgtaacacttgcaagatcaagctgttctgcatgcatcct
gtgcggcaggtaatgatggaaaacaaactggaggtccataaggacaaaacattgcaagaa
gctgtggagatagcatacaagctgatggatttagaagatgcagttccaattgactgctgt
cgtttggtcaagtatgacgagttccatgattacttggagcgttcttatgagggagaggag
gataccccagtggggctacttctgggtggagtgaagtcatcatatatgtttgatttgctc
ctggaaacaagacaacctaatcaaacatttcagccttacaaatctggcgaagtgatggtg
aaagtgcacgtggtcgacctaaaattgggaactctgcttccacccatcagcatccgtgct
tatcttaatcaaacagtcacagagttcaagcagctcatttcccagtgctga
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