Rhincodon typus (whale shark): 109937848
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Entry
109937848 CDS
T06055
Name
(RefSeq) protocadherin-16-like
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
109937848
NCBI-ProteinID:
XP_048477328
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MTLLYVVKAGHSDSISYTISSGDPNGYFAIGVSSGLIRTSIPLDHESHPVVILDVQASSG
SPPAYSSTKVKITISDINDNTPTFPTSSESILVPENTEIGSVIYTVHADDQDSGANGQVQ
FDIVSNEDRTFSIDRTSGKLRVIGSLSYETLPRYDLKIVAKDSGAPQLSSTFTLIIHIQD
ESDNAPIFETLTYRVEVKEGTAVNTRFLQVRALSQDSRDSHITYHLRTDGDSANFGILSE
SGWLYVKSALDRENKDLFSLTVVASSSEGDQRKTGTAMVRVCITDENDNAPKLSEDQYFF
TIQENMPPSSPIGRILATDRDHGINSKLTYRLFPAHSSFQIDSLTGEISSRVTFDRESQA
SHQVTVLVQDGGTPPRSVTGSVYIMVLDENDNSPIFTNVPMGKELVVQVIEGNQSGNLVT
TLQAKDADEGENGTVVYSLAGPWAQLFSLHPTSGELRTSTALYRLERPEYELTALATDRG
QLSQTTSLAVRVQVLSSANSLPQSGSNSLTFSSIEGMAPGSVIGSVASQDASRRANGQVT
YTLVGGTDVDGRFVVDRFTGDIYLAQELDYELGSHYQLEIAIDDLSTALPHSTLTIVDIN
IEDRNEYAPQFAEDPITLVVNENAVVGTSIYTFQAVDKDGSGPNSQILYTLLQQTPPGNV
LQIDPMTGILSAAAIDRETTPFFLLVVQAMDQTVESTQRKSSAVTVRVFVTDENDNEPQF
LSPSVLQVMEDQPIGNIISYIVAQDADLGENSRLSYRIKSGLGANKLRLNPTTGALSIVK
ELDCEEQSWINLTIEASDHGTFRRSATQLLHIQLIDVNDEVPTFDKKLYEASVLENRVAG
TQVIQIHATDRDQGLNGVLRYGGLVDDSFSIDPVTGIITTSRALDREQQDHYQLTVYAKD
SGSPPNVATVTVSIEIKDENDNRPRFEKDVYELQVPENQEPVPLFTVKATDEDLGENGRV
RYEII
NT seq
2896 nt
NT seq
+upstream
nt +downstream
nt
atgacattgctttatgtggttaaagcaggtcactcagactctatctcctacacaatttcc
tctggagatcccaatggttactttgcaattggtgttagctcgggtttgatccggaccagc
attcccttggaccatgagtctcatcctgttgtgattttggatgttcaggctagcagtggt
tcccctcctgcctatagcagtacgaaggtcaagatcacaatatctgacatcaacgataac
acaccgacgttccccacctcttctgagtcgattctggtcccagagaacacagagattggc
tctgttatctataccgtacatgcagacgatcaggatagcggagccaatggccaggttcag
ttcgacattgtttctaatgaagacaggacattcagcattgaccgaacatctgggaagcta
cgcgtgatcggatctttgagctatgaaacgcttccacgctatgacctgaaaattgtggct
aaagacagtggggctccacagctcagctccaccttcacgttaatcattcacattcaggac
gagagtgataatgccccaatctttgagacgttgacctatagggttgaagtcaaagaaggg
acggctgttaacactcgctttctccaggtccgggccctgagtcaggacagcagagacagc
catatcacttaccacctgcggactgatggtgactcagccaatttcggaatcctttctgag
agtggctggttatatgtgaaaagtgcccttgaccgtgagaacaaagaccttttcagtctg
actgttgtggcttcgagcagtgagggtgaccagaggaaaacaggaactgccatggtgcga
gtctgtatcactgatgagaatgacaatgcaccaaagctcagtgaggaccaatactttttc
accatccaggagaacatgccaccttcatcgcccattggacggatcctagcaaccgatcgt
gaccatgggattaacagcaaactgacctacagactgttcccagcacattccagctttcag
atcgactccctcaccggtgagataagctcaagggtaacttttgatcgagagagtcaggcc
agtcaccaggtaactgtgctggttcaagatggtgggacccctcctcgcagcgttaccggt
tcggtctacatcatggttttagacgagaacgataactcacccatcttcaccaatgtgcca
atgggaaaggagctggttgttcaggttattgaaggaaatcaatcaggaaacctggtgaca
actttacaggcgaaggatgcagatgagggagagaatggcactgtggtttattctttggca
ggaccctgggcccagcttttctctcttcacccaacctctggtgaactgcggacaagcaca
gcgctgtacaggctcgagagacctgagtatgagttgacagccctggccactgaccgtgga
caactgtcccagaccacatccctcgcagtccgtgtccaggtactgagctctgccaacagc
ctacctcagtctggtagcaactcactcaccttcagttccatcgaagggatggccccaggc
tctgtcattggttcagtggcctcccaggatgcatcgagacgtgccaatgggcaggtgaca
tacaccctagtgggtggaacagatgtggatgggagatttgttgtggacagattcacaggt
gacatttacttggcgcaggagctggattatgaattgggctcacattaccaactggagatt
gcaattgatgacctgagtacagctctcccccatagcactctcactatcgtcgacattaat
attgaggatcgtaatgagtacgcgccacagtttgctgaggaccccatcactctggtcgtc
aatgagaatgcagtagtcggtacctccatctacactttccaggcagtcgataaagatgga
agtggtcccaacagccagatcctgtacactctcctccaacaaactccccctgggaacgtg
cttcaaattgatcccatgactggaatactatcagcagcagcaattgaccgggagaccact
ccattcttcctgctggtggtacaagccatggaccaaacagtggagagcacccaacggaaa
tcctcagctgtaacagttcgtgtctttgtaaccgatgagaatgacaacgagccccagttc
ctgtctccatcagtgctccaggtcatggaggatcagcccattggcaatatcatctcttac
atcgtcgcccaggatgctgacctgggagagaacagccgactcagttaccggatcaaatct
ggattgggagctaacaagttacgactcaatccgacaacaggggccttgtccattgtgaaa
gagctggattgtgaagagcagagttggattaacctgacgattgaggcctcagaccacgga
acattccggcgctcagccacccagctgctgcacattcagctgattgatgtcaacgatgag
gtgccaacatttgataagaaactttatgaagccagtgtcctggagaatcgagtggctggc
actcaggtcattcagatacatgccactgacagggaccaaggtttgaatggtgttctgaga
tatggagggctggtggatgacagcttctctattgacccagtgactggtatcataacaacc
agtcgagccttagacagagagcaacaggatcactaccaactcacagtttatgctaaagat
agtgggagccctcccaatgttgctacagtgacagtgtccatcgagatcaaagacgagaat
gacaacaggcccaggtttgagaaggatgtgtacgagctgcaagttccagaaaaccaggag
ccagtccccctcttcacagtgaaggcaacagatgaggatttgggtgaaaatggacgtgtg
cgatatgagatcattg
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