KEGG   Rhincodon typus (whale shark): 125480990
Entry
125480990         CDS       T06055                                 
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    125480990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rtp03009]
    125480990
Ribosome biogenesis [BR:rtp03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    125480990
SSDB
Motif
Pfam: EloA-BP1
Other DBs
NCBI-GeneID: 125480990
NCBI-ProteinID: XP_048469877
LinkDB
Position
29:complement(21860365..21909997)
AA seq 970 aa
MLRSTEFFRSIECPFYGGGSGDGGSCNRPYCHFRHRSQKPREKSEGDGQCLAADREHGYD
PYNPELPKGSSRNGDGISSEFTESSSSTLELELVNKAIEVVKNEVEQEQKRLLHYEDLLD
TEEEYVPSTPSTQKALGKNKNCTELLPIEDELTNSLEYNPDSYGLNSNVEYTPTPLSVTA
CFSKYTLDTDDEADAKGNSLKYVPTLLNKPVKYSTSVPSNKYVIDNTKPCTDLEYDPLLN
YSARLMNKKRTKEPGTKRPSENSSEDSYTPAGKKRCHRLNSKICDEEMEFSDSRSKLNDN
YPQSLGDTSKFQNAVLCDTKSDEGFPSKAKDLNKRSMKEIAVQYDVGDVCCFENKRHENR
EKQKLKSSRHSAKVSRVNKDKLKGQEHKDKKSKGGDLNGSKLKACNDKVGSTKIKSSHHA
EKNNKKEKITFEKEIKREKQGETFRHKERNGDNSVVEKKQKGDDKSKTKEEKQKFKNGNS
DRKVDKSKMCKSDEVRGENRSKSRSNSSLDSAGKIKCHGVKITSIQKSDKNNGNSKSKAL
MHKNGIHVSSKRKEEIKESKSMKVKTKHPEKKEKACLTKRTLSHTDLFGDDSSDEESTNK
PAAAMSCELDSDSDRDLSASTSSSDNEKGESCVQHSIPSEDEDEIDFPGLEKEFEFESDP
MEECLRIFNESKEVKNEDKGRVSKQVSVESNEGKESSLTTLFPGQKRRISHISKQENVEP
AKPIIRPFRRLTAQEVCYQRSLMAQQQAAQLAEVEKVVNTPFSNRGEKRRIAHKPKADVM
PSAKQPPIKLKMESLSRTVPSPNCPRSSSLNLKCQTTAGMASKTVSTAAQKRIAHAPTLK
SSLKRPTIPTEYGSKVPTNVRQRYLNVFIDECLKFCGSEEIAYEKALSEEKMVYNRSTSR
TVYLNVAVNTLKKLRSQSDVIPSPTKNTVAVSTSKKVQSHETLLGGMLAMKTSFTLNRSG
KQQDVELTGG
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgctgcgttccaccgagtttttccgcagcatcgagtgcccgttttacggcggcggtagc
ggcgatggcggctcctgcaaccggccttattgtcactttcggcaccgcagccagaagccc
agggagaagtcggagggagacgggcagtgtctagcagccgaccgagaacatggttatgat
ccttataatcctgagcttcctaagggttcatcaagaaatggagatgggatatcaagtgaa
tttacagaatccagctccagtacgctcgaattggaactggtcaacaaagccattgaggtt
gtcaagaatgaagttgaacaagagcagaaaaggctgttgcattatgaggatcttttggat
actgaagaggaatatgtcccttcaacgccatctacacagaaggcacttggcaagaacaag
aattgcacagagcttttacctattgaggatgagctgacaaactctttagaatataatcca
gacagttatggtctaaatagcaatgtagagtacacccctactccactttcagttactgct
tgtttcagtaagtatactttggacacagacgatgaagctgatgcaaaaggtaattcatta
aaatatgttccaacgctcttgaataagccagtcaaatattctacctctgtacccagtaat
aaatatgtaattgacaacaccaagccatgcactgatttagagtatgatcctttgttaaat
tattcagcacggctaatgaacaaaaaaaggacaaaagaacctggaaccaagaggcccagc
gagaacagctcagaagattcctatacacctgcaggaaagaagcgttgccatcgcttgaac
tccaagatctgtgatgaggagatggagttttcagactcaagaagcaaacttaatgataac
tatccgcaaagtcttggggacacttcaaagtttcaaaatgctgtgctttgtgacaccaaa
tctgatgaaggatttccttcaaaggctaaagatttgaataaacgatcaatgaaagagatt
gcggttcagtatgatgtaggtgatgtttgctgttttgaaaacaaacgacacgagaataga
gaaaaacaaaaattaaagtccagtagacattcagctaaggtttcaagagttaataaagac
aaactcaaaggacaagagcataaggataaaaagagtaaaggtggtgacctgaatggctca
aagctgaaggcatgcaatgacaaagtgggcagcacgaaaatcaaatcttcccaccacgca
gagaaaaataacaaaaaggagaaaataacttttgaaaaagaaataaagcgagaaaaacaa
ggggagacatttagacacaaagaaaggaatggggataattcagttgttgaaaagaaacag
aaaggagatgacaaaagcaagaccaaagaagaaaagcaaaagtttaaaaatggaaattct
gatagaaaagtggataaatcaaaaatgtgcaaatcagatgaggtaagaggtgaaaacaga
tcaaaatctagatcgaacagttcattagatagtgcgggaaaaatcaaatgccatggagtt
aagatcacaagtatccagaagtctgacaaaaataatggcaactcaaaatctaaagcattg
atgcataaaaatgggattcatgttagtagcaaaagaaaagaggagatcaaggagtcaaaa
tctatgaaagttaagacaaaacatccagaaaaaaaagagaaagcatgcttaacgaagcga
acactcagtcatactgacttgtttggtgatgacagtagtgatgaagaaagtaccaataaa
cctgccgctgccatgtcttgtgaattagattcagactctgaccgagatctctctgctagc
accagttctagtgataatgaaaagggagaaagttgtgtgcaacactccataccttcagaa
gatgaagatgaaattgatttccctggtcttgaaaaggagtttgaatttgaatctgatcct
atggaggaatgtctaaggattttcaatgagtctaaagaagtaaagaatgaagataaaggc
cgagtttccaagcaggtgtctgtggaaagtaatgaaggaaaagaatccagtctaaccaca
cttttcccagggcagaaaaggagaatttcacacatttcaaagcaagaaaacgtagagcca
gccaagccaatcatccgtccttttcgtagacttactgcccaagaggtttgttaccagcgg
agtttgatggcacagcagcaagcggcacagctggcagaagtggaaaaagtagttaataca
cctttcagcaatcgaggggagaagagacgaattgcacataaaccaaaagcagatgttatg
ccctcggcaaaacaacctccaataaaattgaagatggaatctttaagtagaacagtacca
tctccgaattgtccaaggagcagcagcctcaatttaaaatgtcaaactactgctggtatg
gcatcaaaaactgtatccactgcagcacagaagaggatagctcatgctcccactttgaag
tcaagcttgaagagacccacaattccaacagaatatggctccaaagttccaacaaatgtg
agacagcgatatttgaatgtcttcattgatgaatgtctgaaattctgtgggtccgaagaa
atagcctatgaaaaggctttaagtgaagagaagatggtatataaccgaagtaccagtaga
acagtatatttgaatgttgctgtaaatacattgaagaagttgaggagtcaaagtgatgtc
attccgtcacctacaaagaacacggttgccgtaagcacaagcaagaaagtccagtcgcat
gaaacattgcttgggggaatgttggctatgaagacaagtttcacactcaatagatctggg
aagcaacaagatgttgaactgacaggtgggtga

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