Rhincodon typus (whale shark): 125480990
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Entry
125480990 CDS
T06055
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125480990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
125480990
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
Pre-60S particles
RNases
125480990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
125480990
NCBI-ProteinID:
XP_048469877
LinkDB
All DBs
Position
29:complement(21860365..21909997)
Genome browser
AA seq
970 aa
AA seq
DB search
MLRSTEFFRSIECPFYGGGSGDGGSCNRPYCHFRHRSQKPREKSEGDGQCLAADREHGYD
PYNPELPKGSSRNGDGISSEFTESSSSTLELELVNKAIEVVKNEVEQEQKRLLHYEDLLD
TEEEYVPSTPSTQKALGKNKNCTELLPIEDELTNSLEYNPDSYGLNSNVEYTPTPLSVTA
CFSKYTLDTDDEADAKGNSLKYVPTLLNKPVKYSTSVPSNKYVIDNTKPCTDLEYDPLLN
YSARLMNKKRTKEPGTKRPSENSSEDSYTPAGKKRCHRLNSKICDEEMEFSDSRSKLNDN
YPQSLGDTSKFQNAVLCDTKSDEGFPSKAKDLNKRSMKEIAVQYDVGDVCCFENKRHENR
EKQKLKSSRHSAKVSRVNKDKLKGQEHKDKKSKGGDLNGSKLKACNDKVGSTKIKSSHHA
EKNNKKEKITFEKEIKREKQGETFRHKERNGDNSVVEKKQKGDDKSKTKEEKQKFKNGNS
DRKVDKSKMCKSDEVRGENRSKSRSNSSLDSAGKIKCHGVKITSIQKSDKNNGNSKSKAL
MHKNGIHVSSKRKEEIKESKSMKVKTKHPEKKEKACLTKRTLSHTDLFGDDSSDEESTNK
PAAAMSCELDSDSDRDLSASTSSSDNEKGESCVQHSIPSEDEDEIDFPGLEKEFEFESDP
MEECLRIFNESKEVKNEDKGRVSKQVSVESNEGKESSLTTLFPGQKRRISHISKQENVEP
AKPIIRPFRRLTAQEVCYQRSLMAQQQAAQLAEVEKVVNTPFSNRGEKRRIAHKPKADVM
PSAKQPPIKLKMESLSRTVPSPNCPRSSSLNLKCQTTAGMASKTVSTAAQKRIAHAPTLK
SSLKRPTIPTEYGSKVPTNVRQRYLNVFIDECLKFCGSEEIAYEKALSEEKMVYNRSTSR
TVYLNVAVNTLKKLRSQSDVIPSPTKNTVAVSTSKKVQSHETLLGGMLAMKTSFTLNRSG
KQQDVELTGG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgttccaccgagtttttccgcagcatcgagtgcccgttttacggcggcggtagc
ggcgatggcggctcctgcaaccggccttattgtcactttcggcaccgcagccagaagccc
agggagaagtcggagggagacgggcagtgtctagcagccgaccgagaacatggttatgat
ccttataatcctgagcttcctaagggttcatcaagaaatggagatgggatatcaagtgaa
tttacagaatccagctccagtacgctcgaattggaactggtcaacaaagccattgaggtt
gtcaagaatgaagttgaacaagagcagaaaaggctgttgcattatgaggatcttttggat
actgaagaggaatatgtcccttcaacgccatctacacagaaggcacttggcaagaacaag
aattgcacagagcttttacctattgaggatgagctgacaaactctttagaatataatcca
gacagttatggtctaaatagcaatgtagagtacacccctactccactttcagttactgct
tgtttcagtaagtatactttggacacagacgatgaagctgatgcaaaaggtaattcatta
aaatatgttccaacgctcttgaataagccagtcaaatattctacctctgtacccagtaat
aaatatgtaattgacaacaccaagccatgcactgatttagagtatgatcctttgttaaat
tattcagcacggctaatgaacaaaaaaaggacaaaagaacctggaaccaagaggcccagc
gagaacagctcagaagattcctatacacctgcaggaaagaagcgttgccatcgcttgaac
tccaagatctgtgatgaggagatggagttttcagactcaagaagcaaacttaatgataac
tatccgcaaagtcttggggacacttcaaagtttcaaaatgctgtgctttgtgacaccaaa
tctgatgaaggatttccttcaaaggctaaagatttgaataaacgatcaatgaaagagatt
gcggttcagtatgatgtaggtgatgtttgctgttttgaaaacaaacgacacgagaataga
gaaaaacaaaaattaaagtccagtagacattcagctaaggtttcaagagttaataaagac
aaactcaaaggacaagagcataaggataaaaagagtaaaggtggtgacctgaatggctca
aagctgaaggcatgcaatgacaaagtgggcagcacgaaaatcaaatcttcccaccacgca
gagaaaaataacaaaaaggagaaaataacttttgaaaaagaaataaagcgagaaaaacaa
ggggagacatttagacacaaagaaaggaatggggataattcagttgttgaaaagaaacag
aaaggagatgacaaaagcaagaccaaagaagaaaagcaaaagtttaaaaatggaaattct
gatagaaaagtggataaatcaaaaatgtgcaaatcagatgaggtaagaggtgaaaacaga
tcaaaatctagatcgaacagttcattagatagtgcgggaaaaatcaaatgccatggagtt
aagatcacaagtatccagaagtctgacaaaaataatggcaactcaaaatctaaagcattg
atgcataaaaatgggattcatgttagtagcaaaagaaaagaggagatcaaggagtcaaaa
tctatgaaagttaagacaaaacatccagaaaaaaaagagaaagcatgcttaacgaagcga
acactcagtcatactgacttgtttggtgatgacagtagtgatgaagaaagtaccaataaa
cctgccgctgccatgtcttgtgaattagattcagactctgaccgagatctctctgctagc
accagttctagtgataatgaaaagggagaaagttgtgtgcaacactccataccttcagaa
gatgaagatgaaattgatttccctggtcttgaaaaggagtttgaatttgaatctgatcct
atggaggaatgtctaaggattttcaatgagtctaaagaagtaaagaatgaagataaaggc
cgagtttccaagcaggtgtctgtggaaagtaatgaaggaaaagaatccagtctaaccaca
cttttcccagggcagaaaaggagaatttcacacatttcaaagcaagaaaacgtagagcca
gccaagccaatcatccgtccttttcgtagacttactgcccaagaggtttgttaccagcgg
agtttgatggcacagcagcaagcggcacagctggcagaagtggaaaaagtagttaataca
cctttcagcaatcgaggggagaagagacgaattgcacataaaccaaaagcagatgttatg
ccctcggcaaaacaacctccaataaaattgaagatggaatctttaagtagaacagtacca
tctccgaattgtccaaggagcagcagcctcaatttaaaatgtcaaactactgctggtatg
gcatcaaaaactgtatccactgcagcacagaagaggatagctcatgctcccactttgaag
tcaagcttgaagagacccacaattccaacagaatatggctccaaagttccaacaaatgtg
agacagcgatatttgaatgtcttcattgatgaatgtctgaaattctgtgggtccgaagaa
atagcctatgaaaaggctttaagtgaagagaagatggtatataaccgaagtaccagtaga
acagtatatttgaatgttgctgtaaatacattgaagaagttgaggagtcaaagtgatgtc
attccgtcacctacaaagaacacggttgccgtaagcacaagcaagaaagtccagtcgcat
gaaacattgcttgggggaatgttggctatgaagacaagtttcacactcaatagatctggg
aagcaacaagatgttgaactgacaggtgggtga
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