Rhincodon typus (whale shark): 125487523
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Entry
125487523 CDS
T06055
Name
(RefSeq) probable G-protein coupled receptor 139
KO
K04282
thyrotropin-releasing hormone receptor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125487523
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125487523
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
125487523
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
125487523
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
UPF0060
Motif
Other DBs
NCBI-GeneID:
125487523
NCBI-ProteinID:
XP_048475122
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All DBs
Position
42:9666047..9741763
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AA seq
316 aa
AA seq
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MAFNEPLILQNKQANLAVIVILSRRRCGLSGCIIYYLLSMAVADLLVIVTAVILNRMTGI
FSPFSFLSITPVCSVRTAINFAVVDSSAWLTVTFTFDRFVAISCQKLKVKYCTENVAIAV
IGIVSTLSSLKSIFIYFAFEPVYIMNKIPWLCTVKDIFYTSPAWTAYDWFRCILNPLLPF
FLILLLNALTVRHILAANRARRRLRTQKNGENQSDPEMEKRKKSIVLLFAISGSFILLNL
LFFVTIFNIRIGNATYHSGSANSNSTFTLQEGGYMLQILSSCINPFIYAGTQSKFRTELK
KGIKYPLSLLINLRQI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaatgagccgcttattctacaaaacaagcaagctaacttggcagtaattgtg
atcttgtcccgaagaagatgtggtctctctggatgcatcatttattacttgctgtccatg
gcagtggcagatcttctagtaatagtcacggctgtgatactaaaccggatgactgggatc
ttttcaccttttagtttcctatctatcacaccagtatgcagtgtgcgtactgcaataaac
tttgcagttgtcgacagttcagcctggttaacagtcactttcacgtttgatcgatttgtg
gccatttcttgtcagaaactgaaagtaaaatattgcacagagaatgtggctatagcagtt
ataggtatagtttccacattgtcctccctaaaaagtatcttcatatattttgcatttgaa
cctgtctacataatgaacaagataccctggctctgcaccgtaaaagatatattttataca
tctcctgcatggacagcatatgactggtttcgctgcattttaaaccctctgctcccattc
ttccttattttactgctcaatgctctgactgtcagacacattctagcagctaatagagcc
cgtaggagactcaggacccagaagaatggcgagaatcagagtgacccagagatggagaaa
cggaaaaagtccattgttttactttttgcaatctcaggcagttttattctgttaaattta
ttattttttgtcacgatcttcaatatccgaattgggaatgctacttatcactcaggctct
gccaacagtaattccacatttacacttcaagaaggcggatatatgcttcaaatattgagt
tcctgcatcaatccgtttatttatgctgggacccagagtaaattcagaactgagttaaag
aaggggattaaatatccgttaagcctactgatcaatttaagacagatctga
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