Rhizobium tropici: RTCIAT899_CH18305
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Entry
RTCIAT899_CH18305 CDS
T02432
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00521
Streptomycin biosynthesis
rtr00523
Polyketide sugar unit biosynthesis
rtr00541
O-Antigen nucleotide sugar biosynthesis
rtr01100
Metabolic pathways
rtr01110
Biosynthesis of secondary metabolites
rtr01250
Biosynthesis of nucleotide sugars
Module
rtr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RTCIAT899_CH18305 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RTCIAT899_CH18305 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RTCIAT899_CH18305 (rfbC)
Enzymes [BR:
rtr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RTCIAT899_CH18305 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AGB73021
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All DBs
Position
complement(3735379..3735927)
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AA seq
182 aa
AA seq
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MKAIDTAIPDVKIIEPTVFADDRGFFFESFNQAKFEAAIGRSADFVQDNHSRSGRGVLRG
LHYQLPPHAQAKLVRVVVGEVYDVAVDIRKSSPTFGQWVGVLLSAENKRQLWIPEGFAHG
FLTLSDHVEFLYKTTNYYAPESDRGIRWDDPKIAIDWKFNGQPTLSAKDQRQPLLADGEL
FD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccatcgataccgctattcccgatgtcaagattatcgaaccgacggtgtttgca
gacgatcgcggcttcttcttcgaaagcttcaatcaggcgaagttcgaagcagcgatcggc
cgaagtgccgatttcgtgcaggacaatcacagccggtcgggcaggggtgtcctacgcggt
ctccactatcagctgccgccgcatgcgcaggcgaagctggtgcgggttgtagttggcgaa
gtctatgatgttgccgtcgacatcaggaaatcctcgcccacattcggccaatgggtcggc
gttcttctgtctgcggaaaacaagcgtcagctctggatcccagaaggcttcgcccatggc
ttcctgacattgagcgaccatgtcgagtttctctacaagaccaccaactattacgcgccg
gagagcgatcgcggcatccgctgggacgatccgaagatcgctatcgattggaaattcaat
ggtcagccgacgctttctgccaaggatcagcggcagccgctgcttgcggatggcgagcta
ttcgattga
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