Raoultibacter timonensis: CE91St31_30230
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Entry
CE91St31_30230 CDS
T08072
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rts
Raoultibacter timonensis
Pathway
rts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE91St31_30230 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rts03019
]
CE91St31_30230 (recQ)
03400 DNA repair and recombination proteins [BR:
rts03400
]
CE91St31_30230 (recQ)
Enzymes [BR:
rts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CE91St31_30230 (recQ)
Messenger RNA biogenesis [BR:
rts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CE91St31_30230 (recQ)
DNA repair and recombination proteins [BR:
rts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CE91St31_30230 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
HHH
Hydrolase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BDF52293
LinkDB
All DBs
Position
complement(3664036..3665904)
Genome browser
AA seq
622 aa
AA seq
DB search
MLEQATKALKDYFGHADFRANQRELIEQVLDDRDVLAVMPTGAGKSLVYQVPAIVSEGLA
IVVSPLISLMKDQVNALTQAGVRAAFLNSSISPAEQAEVLEYAASGSCKLLYVAPERLDA
PRFLSLCKTTKISLVAVDEAHCVSQWGQDFRPSYLGIAAFIGSLPNRPPVCALTATATPE
VQKDIAHALGLIDPFSLVSGFDRPNLYFGVERPDPKAKRACLLRLVRERSGQAGIVYCST
RQAVEDVCDLLCEGGFEATRYHAGLSAAERHANQEDFLFDRKPLMVATNAFGMGIDKSNV
SFVIHYNMPSDVESYYQEAGRAGRDGSPADCILIYNKKDVQTCQFLIDKGYEQRQSEGDE
ERSHTLYERDCERLRQMVFYSTSTDCLRSFILRYFGQTEAPFRCEHCSNCSTDYAVEDVT
VEAQKILSCVLRLGQRNRQAGKALIVDILRGSKAEKIFAQGYDSLTTYGIMDEVPSKRIR
YVLDALVAEGLLAQTDGSYPVIEATERGAAFLRDRKALEIKVPKRLPKEELPDTGARSRR
RSPGSGSADSELFEKLKTVRFELASEAGVPAYIVFSNATLSDMCEKMPASIEELLAVSGV
GQVKAERYGSAFLDAIRAHRAG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggcgaccaaggcactcaaagactatttcggccatgcggatttcagggcg
aatcaacgcgagcttatcgagcaggtgctcgacgaccgcgacgttttggccgttatgccg
acgggtgccggcaaatcgctcgtataccaggtgccggcgattgtttccgaggggctcgcc
atcgtcgtgtccccgctcatttcgctcatgaaagatcaggtgaacgctctgacccaagcg
ggggttcgggcggcgttcctcaatagctcgatctctccggccgaacaggcggaggtgctc
gaatacgccgcttcgggatcgtgcaagcttctctatgtggcacccgagcgtctcgacgcc
ccgcggtttctctcgttgtgcaaaacgacgaaaatatcgctggtggcggtagacgaggcc
cattgcgtatcgcagtgggggcaggatttccggccgagctatttggggatagccgcgttc
atcgggagcttgccgaaccgcccgcccgtctgcgcgctcacggcaacggcgacgcccgag
gtgcagaaggatatcgcccacgcgctcgggctcatcgaccccttctcgctcgtttcgggc
ttcgatcgcccgaacctctacttcggagtcgaacgccccgatccgaaagcaaagcgcgcg
tgcttgctgcgccttgtgcgcgagcgctcggggcaggcgggtatcgtgtactgctcgacg
aggcaggcggtcgaagatgtctgcgatctgttgtgcgagggcggattcgaggcgacgcgc
taccatgcggggctctccgccgcagagaggcatgcgaaccaagaggatttcctgttcgat
cgcaaacccctcatggtggccaccaacgcgttcggtatgggcatcgacaaatcgaacgtg
agcttcgtcatccactacaacatgccgtccgacgtggagagctattatcaggaggcgggc
cgcgcgggccgtgacggaagccctgccgattgcatcctcatctataacaagaaagacgtg
cagacctgccagttccttatcgacaagggatacgagcagcgccaaagcgaaggcgacgag
gaacggtcgcacaccctgtacgaacgagattgcgagcgcctgcgccagatggtgttctac
agcacatcgaccgactgccttcgctcgttcatcctgcgctatttcgggcagaccgaagca
ccgtttcgctgcgagcactgttcgaactgctcaaccgattatgctgtcgaggacgtgacg
gttgaggcgcagaagatcctctcatgcgtgcttcgcctggggcaacgcaatcgccaagcg
ggcaaagcgctcatcgtcgacatcctgcgcggttcgaaagccgaaaagatcttcgcacag
ggctacgatagcctgaccacgtacggcatcatggacgaggttccctcgaagcgcatccgc
tacgtgctcgatgcgcttgtggccgaggggctgctcgctcaaacagacggcagctatccg
gttatcgaggcaaccgagcggggtgcggcgtttttgcgggatcgcaaagcgctcgagatc
aaggtgccgaagcggctaccgaaggaggaactccccgatacgggcgcacgctcaaggcgc
cgttcgccgggttctggctcggccgattcggagcttttcgaaaaactcaaaaccgtgcgg
ttcgaacttgcgtcggaggcgggcgttcccgcatacatcgtgttctcgaacgcaacgctc
tccgatatgtgcgagaagatgcccgcgagcatcgaggagctgcttgccgtttccggtgtc
ggccaggtgaaggccgagcgctacggaagcgcgtttctggatgccattcgagcgcatcgg
gcggggtag
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