Rhizobium tumorigenes: PR017_03740
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Entry
PR017_03740 CDS
T08990
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PR017_03740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_03740
Enzymes [BR:
rtu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PR017_03740
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PR017_03740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WFR96262
LinkDB
All DBs
Position
complement(757577..758455)
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AA seq
292 aa
AA seq
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MISVQDLSPAELAALLHFHADAGISWMLEEDPVDRFAEFEALKAARQAGRPAPAPSPTPV
SQIANAAERRPSAQAVATAPTATARAPAIPDEQAIDQARFAAESARSLPELKAALEAFNG
CNLKNSARSTLFASGNPESGIMVIGPMPGADDDREGAVFAGRSGLLLDRMLASIGIDRNG
ILLTNVIPWRPPGNRAPSIPETDICRPFIERQIALAEPKVLLLLGNFTARFFFGGNETIH
ALRGHWREIGAGAGSVPAIATLHPQDLLTAPINKRLAWQDLLAFRRRIDAAS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgttcaagacctctccccggccgaacttgccgcgcttttgcatttccatgcc
gacgcgggcatcagttggatgctggaagaggatccagtggaccgctttgccgaattcgag
gcgctgaaagcggcgagacaggcggggcgtccggcgccggcaccctcgcctacgccggta
agccagatcgccaacgctgccgaacgtcggccttcggcacaggcggttgcgactgcgcca
actgctaccgcgcgcgcgccggccattccagacgaacaggctatagaccaggcgcgcttt
gccgccgaaagcgctcgctcgctgccggaactgaaagccgccctggaagccttcaacggc
tgcaatctgaagaacagcgcgcgctcgacactgtttgcgagcggcaacccggagagcggc
atcatggtcatcggcccgatgccaggcgccgacgatgaccgcgagggcgctgtgttcgcc
ggacggtccggccttcttctcgaccggatgctggcgtcgatcggcattgatcgcaacggg
atattgctcaccaatgtcattccctggcgtccgcccggcaaccgggcgccatccattccg
gaaacggacatctgccgccccttcatcgagcgacaaatcgccttggcagagccgaaagtc
ctgctgttactcggaaatttcaccgcgcgcttcttcttcggcggtaacgagaccatccat
gccctgcgcggacactggcgcgaaatcggcgccggagccggctctgtcccggcgattgcg
acgctgcatcctcaggacctgctgactgcgccgatcaataagcgattggcctggcaggat
cttctggcttttcgccgccgtatcgatgcagcgtcataa
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