Rathayibacter toxicus 70137: TI83_04980
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Entry
TI83_04980 CDS
T03670
Name
(GenBank) UDP-N-acetylmuramyl peptide synthase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rtx
Rathayibacter toxicus 70137
Pathway
rtx00300
Lysine biosynthesis
rtx00550
Peptidoglycan biosynthesis
rtx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TI83_04980
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TI83_04980
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtx01011
]
TI83_04980
Enzymes [BR:
rtx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
TI83_04980
Peptidoglycan biosynthesis and degradation proteins [BR:
rtx01011
]
Precursor biosynthesis
Amino acid ligase
TI83_04980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
AJM77473
UniProt:
A0A0C5B9H5
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Position
1099213..1100775
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AA seq
520 aa
AA seq
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MHDTRPLSSLRPEHPVPRSLSQLIAEFALDSVQGAEGVEIRGITLDSHQVEAGDLYVGVA
GRRTHGAAFASAAASSGAVAVLTDPEGAALAADSGLPVLITPDPRAALGDVAAWIYRTGE
NTSTLLGVTGTNGKTSVVYLLDALLRRLGVVSGLSSTAERRIGDVAVVSSLTTPEASELH
GLLARMQESAVRAVSIEVSAQALSRHRIDGLVFAVVGFTNLSHDHLDDYSDMEEYFEAKA
GLFEPERARRGVVTVDSVWGRRLAERSRIPVATLATSSVQGLAPETPADWWMTVIEATAD
STTFRLDGPQNRSVVVNVSLIGWYMAANTALAIVMLVESGFDLDAITHALDDSRLEVYIP
GRAELVSGERGPRVYVDYGHTPDAFSNALEALRAITPGRVIMVFGADGDRDRTKRGAMGS
IAARLADVVIVTDFHPRWEDPAAIRAALLTAATGAVPDREIHEVPDPRSAVRAAIALARE
GDSILYAGPGHEDYQEIAGVHMPYSARDDVRQALREAGWL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgacactcgcccgctgtcctccctgcgtcccgaacatccggtcccgcggtcactc
tcccagctcatcgccgaatttgcgctcgattctgtgcagggagccgagggcgtcgaaatc
agagggatcacgctcgactcgcaccaggtcgaggccggtgacttgtatgtgggcgtcgcg
ggtcgtcggactcacggcgcagcgttcgcctctgcggcagcgtcctccggagcggttgct
gtcctcaccgacccagagggggcggccttggcagcagatagtggccttcccgtgctgatt
acgccagacccacgtgcagcgctcggcgacgtggctgcgtggatctatcgcaccggggag
aacacgtcgaccctgctcggcgtcactgggacgaacggtaaaaccagtgttgtttacctc
cttgacgctcttctgcggcggcttggcgttgtctcgggtctcagctcgacagcggagcgt
cgcatcggcgacgtggccgtggtcagctcactgaccacccctgaggcaagtgagctacat
ggcttgctggcacggatgcaggaatcagcggtgcgcgcggtgtcgattgaggtgtcggcg
caggcgttgagtcggcaccgtatcgacgggcttgttttcgctgtcgttggtttcaccaac
ctcagccacgatcacctcgatgactattccgacatggaggaatatttcgaggcgaaagct
ggcctgtttgagccggaacgggctcgccggggtgtggtcacagtcgacagcgtctggggt
cgccgactcgccgagcgcagccgcatccctgttgcgaccctcgccacgtcctctgtccag
ggccttgccccggagacgccagcagactggtggatgacggtgatcgaggccacggcggac
agcacaactttccggctcgatggtccgcaaaatcgatcagttgtcgtcaacgtctcgctg
atcggctggtacatggcggccaacactgcgctggcgattgtcatgttggtcgagtccggt
ttcgacctcgacgctattacgcatgcgcttgatgacagtcggcttgaggtgtatattccc
ggtcgcgctgagctcgtttctggtgaacgtgggccgcgtgtctacgtcgattacgggcac
accccggatgccttctcgaatgctctcgaggcattgcgggcgatcactcctggtcgtgtg
attatggtgttcggtgctgacggcgatcgtgatcggaccaaacggggagcaatggggtcg
atcgccgctcgcctcgcggatgtcgtgattgtcaccgattttcatccgcggtgggaggat
ccggccgcgatccgcgctgcgcttctcacagcagcgaccggcgcggtgcccgatcgggag
atccacgaggttcccgatcctcgttctgctgtgcgtgcggctatcgcccttgcgcgcgaa
ggggattcgatcctgtatgccggaccgggtcatgaggattaccaagaaattgcgggagtg
cacatgccgtattccgccagagacgatgtccgccaggctttgcgcgaagcgggctggctc
tag
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