Ruficoccus sp. ZRK36: K0V07_05415
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Entry
K0V07_05415 CDS
T07427
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi01501
beta-Lactam resistance
rufi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0V07_05415
01503 Cationic antimicrobial peptide (CAMP) resistance
K0V07_05415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rufi02000
]
K0V07_05415
01504 Antimicrobial resistance genes [BR:
rufi01504
]
K0V07_05415
Transporters [BR:
rufi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0V07_05415
Antimicrobial resistance genes [BR:
rufi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0V07_05415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QYY36915
LinkDB
All DBs
Position
1231758..1234946
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AA seq
1062 aa
AA seq
DB search
MLSRFFLVRPVFAWVVSIIMMVAGLLAIYTLPVSQYPPIAPPSIAITATYPGASAETVEN
SVTQIIEQKMTGFDDMLYMSATSDSSGSSRIELTFEPGTDPDMAWSQVQNKLQLAMASLP
DVVQRQGVKVGKSTRNYLMIVAVVSEDGSMDEYDLHDFAQSDLEKILSRVPGVGEVEVFG
TQYAMRVWLDPDRLTEYQMTVQDVINGLQSYNVEVSAGQFGAAPTVEGQRLNAVVTVQTM
LKTPEEFGEVPLRINPDGSTVRVNDVARVELGSENYDTSAYYNNKPTAALAIRQAAGANA
LQTANNIRNRIDEMMPYFPAGLKVVYPYDTTPFVEVAIHEVVKTLFEAILLVFLVMYVFL
GNIRATLIPTIAVPVVILGTFAILGLFGFSINMLTMFAMVLAIGLLVDDAIVVVENVERI
MHDEGLPPFEATRKSMDEITPALIGIGLVLSAVFGPMAFFAGSTGVIYRQFSVTIIAAMM
LSVLVALVLTPVLCASLLKPVKKGHNASESGLRILRPFFRWFERTFEKTRAHYLSVVGNS
LHKQLRYIVVFIVIAVAMGYLFKKMPTAYLPNEDQGVLMVQATLPGNSTLEQTEEIMKEV
SRYFLEEEGDAVESALFISGTNFAGRGQNSGMAFIKLKDWELRQHAGMDVNSIAGRASAH
FAQIRNGLVFAFPPPAVLELGHAKGFDFELLDLGGLGHEKLMEARNQLLGMAAQDPELQK
VRPNGLEDVAQYDVNVDWEKAGALGVPIDSIHNTISASFGSSYVNDFIQNGRVKRVYVQS
DAPFRTAPEDLEKLYVRNVEGTMVPFLSFASGEWTYGSPKLERYNAFPAINILGEPAEGI
SSGQAMAKMESFVEKLPAGIGFDWNGLSYQERQAGSQSGVLYAFSILVIFLCLAALYESW
SIPISVLLALPLGVIGGVIASSLRGLPNDVYFQIGLLTTLGLTTKNAILIVQFAKQRLDD
GMRVIDATLEAAKLRLRPILMTSLAFGFGVLPLAMATGAGAGAQKAIGTSVLGGVVTSTF
LVTVFAPLFYVLVERFGRVFSKKKREQAARNQEAARQQHPAS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaagattctttctagtccgacccgtttttgcctgggtggtgtccatcatcatg
atggtcgccggcctgctggctatttacacgctgcctgtttcccagtatccgccgatcgcg
ccgccctcgatcgccattacggccacctatccgggggcgtcggctgagacggtggagaac
agcgtcacccagatcatcgagcagaagatgacgggctttgacgatatgctctacatgagc
gccacgagtgactcctcgggcagctcgcgtatcgagctgaccttcgagccggggacggac
ccggatatggcctggtcgcaggtgcagaacaagctccagctcgccatggccagcctgccg
gatgtggtgcagcgccagggggtgaaggtcgggaagtcgacccgcaactacctgatgatt
gtggccgttgtctccgaggacgggagcatggacgagtacgacctgcatgactttgcccag
tcggacctggagaaaattctctcccgcgtgcccggtgtgggtgaggtggaagtttttggc
acacagtacgcgatgcgcgtgtggctggaccctgatcggctgaccgagtaccagatgacg
gtgcaggacgtgatcaacggcctgcagtcctataacgtcgaagtctcagcgggccagttt
ggagccgcgccgacggtggaggggcagcgcctgaatgccgtggtcacggtgcagacgatg
ctgaagacgcccgaagagtttggtgaagtgcctctgcgtatcaatccggatggctccacg
gtgcgtgtcaatgatgtggcacgtgtcgagctgggctcggaaaactacgacacgtcggcc
tactacaacaataagccgacggcggccctggccatccgccaggctgcgggtgccaacgcc
ctgcagaccgcgaacaacattcgcaatcgtatcgacgagatgatgccgtacttcccggca
ggcctcaaggtggtgtatccgtatgacactacgcctttcgtcgaggtcgctattcacgag
gtggtgaagacgctctttgaggcgatcctgctggtgttcctggttatgtacgtgttcctc
gggaatatccgcgccacgcttatcccgaccatcgcggtgccggtggttatcctggggact
tttgcgatcctggggctgttcggattttccattaacatgctgacgatgttcgccatggtg
ctggccattggcctgctggtggacgatgccatcgtggtggtggaaaacgtcgagcgtatc
atgcacgacgagggcttgccgccttttgaggcgacgcgcaagtcgatggacgaaatcacc
ccggcgctgatcggtatcggtctggtgctctcggcggtgttcgggccgatggcgtttttc
gccggttcgaccggtgttatctaccgtcagttctcggtcacgattatcgcggccatgatg
ctgtccgtgctggtggcgctggtgctgacaccggtgctgtgcgcctcgctgctcaagccc
gtgaagaaggggcacaacgcctccgagagcgggctgcgtatcctgcgcccgttctttagg
tggttcgagcgtacgtttgagaagacgcgggctcattacctgagcgtggttggaaacagc
ctgcacaagcagctgcggtacatcgtggtgtttatcgtcatcgcggtggcgatgggttat
ctctttaagaagatgccgacggcctacctgcccaatgaggaccagggcgtgctgatggtg
caggccaccctgccgggtaactccacactcgagcagaccgaggagatcatgaaggaggtc
tcacgctacttcctggaagaggagggcgatgcggtggagtctgcgctctttatctccggt
acgaatttcgcagggcgtggccagaactccgggatggcctttattaaactgaaggactgg
gagctgcgccagcacgcgggcatggatgtgaacagcattgctggccgcgcctctgctcac
ttcgcccaaatccgtaacggcctggtcttcgccttcccgcctccggcggtgctcgagctg
ggccacgccaagggctttgacttcgagctgctggacctcggcggtctgggccacgagaag
ctgatggaagcccgtaaccagctcttggggatggctgcccaggaccctgaactgcagaag
gttcgtccgaatggtttggaagacgtggcgcagtacgacgtcaacgttgactgggaaaag
gccggtgcgctgggcgtgccgatcgactcgatccacaacacgatctcggccagctttggt
agctcgtatgtgaacgactttatccagaatggtcgcgtcaagcgcgtctacgtacagtcg
gatgcgcctttccgcacagctccagaggatctggaaaagctctacgtgcgcaatgttgag
ggcacgatggtgccgttcctgtcctttgccagtggtgagtggacctatggctcgccgaag
ctggaacgctacaacgccttcccggcgatcaacatcttgggtgagcccgcagagggcatc
agctccgggcaggcgatggcgaagatggaaagcttcgtcgagaagctgcccgccgggatc
ggctttgactggaacgggctctcgtatcaggagcggcaggcgggctcgcagtccggcgtg
ctctatgcgttctcgattctggtgatcttcctctgtctggctgcgctctatgaaagctgg
tccatcccgatttccgtgctcctggcgctgccgctgggggtgatcgggggcgttatcgcc
tcgtcgttgcgcggacttcccaatgacgtgtatttccagatcggcttgctgacgacgctt
ggcctgacgaccaagaacgcgatcctgatcgtgcagtttgccaagcagagactggacgac
ggtatgcgcgtgatcgatgcgaccctggaggctgctaagctccgcttgcgcccgattctg
atgacctcgctggcgttcggctttggggtgcttcctctggccatggcgaccggtgcaggt
gccggtgcccagaaggcgattggcacgagtgtgctggggggcgtggtcacctcgaccttc
ctcgtcacggttttcgcaccgttgttctacgtgttggtcgagcggtttgggcgtgtcttc
agcaagaagaaacgcgagcaggccgcccgcaatcaggaggctgcccggcagcaacacccg
gcttcctag
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