Rugamonas sp. DEMB1: QC826_13975
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Entry
QC826_13975 CDS
T08988
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug03030
DNA replication
rug03430
Mismatch repair
rug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QC826_13975
03430 Mismatch repair
QC826_13975
03440 Homologous recombination
QC826_13975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rug03032
]
QC826_13975
03400 DNA repair and recombination proteins [BR:
rug03400
]
QC826_13975
Enzymes [BR:
rug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QC826_13975
DNA replication proteins [BR:
rug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QC826_13975
DNA repair and recombination proteins [BR:
rug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QC826_13975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
YAcAr
TsaE
NACHT
RNA_helicase
TniB
Motif
Other DBs
NCBI-ProteinID:
WGG53116
LinkDB
All DBs
Position
complement(3087427..3088464)
Genome browser
AA seq
345 aa
AA seq
DB search
MSNSIYPWQESSWQQLQQLRQRMPHAILFHGAAGIGKSDFIERFAQGLLCEAVLPSGHAC
GQCASCGWFTQHNHPDYRRVRPEALEDEPPADGEEGGDGESKKTAKSAKAPSKEIKIEQI
RNLADFMNISTHRQGLRVVVLYPAEALNMPASNALLKTLEEPPPGTVFLLASNSLDRLLP
TILSRCRKFALPMPSHAEALAWLKAQGVADADSWLREQGGAPLAAMAQAETGNRDDMDAL
LQLLAHPSIEGALKTAEKLQKVSLSAQVSWVQRWLYDLFSYKLAGSVRYYPRYQRELASL
ADKIHVSRLLAAIKSANERRATADHPLSPKLFIEDMLLDYTACCA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcaatttatccttggcaagaatcgtcctggcaacagctgcaacagctgcgc
cagcgcatgccccacgccatcctgttccatggcgccgccgggataggcaagtccgacttt
atcgagcgcttcgcccagggcctgctgtgcgaggccgtgctgcccagcggccacgcctgc
ggccagtgcgcctcctgcggctggttcacccagcacaaccaccccgactaccgccgcgtg
cggcccgaggcgctggaggacgagccgccggccgacggcgaggagggtggcgacggcgag
tccaaaaagaccgccaagtcggccaaggcgccgtcgaaagagatcaagatcgagcagatc
cgcaatctggccgacttcatgaacatttccacccaccgccagggtctgcgcgtggtggtg
ctgtacccggccgaggcgctcaacatgccggcctcgaacgcgctgctgaagaccctggag
gagccgccgccgggcaccgtcttcctgctcgcctcgaacagcctggaccggctgctgccg
acgatcttgtcgcgctgccgcaagttcgccctgcccatgcccagccacgccgaggcgctg
gcctggctcaaggcgcagggcgtggccgacgccgacagctggctgcgcgagcagggcggc
gcgccgttggcggcgatggcccaggccgaaaccggcaaccgcgacgacatggacgcgctg
ctgcaactgctggcccatccgagcatcgagggcgcgctgaagacggcggaaaaattgcag
aaggtgagcctgtcggcgcaggtttcctgggttcagcgctggctttacgacctgttttcc
tacaaactggcaggcagcgtgcgctactacccgcgttaccagcgcgagctggccagcctg
gccgacaagatccacgtcagccgcctgttggccgccatcaagagcgccaacgagcgtcgc
gccacggccgaccaccccttgtcgcccaagttgttcatcgaagacatgttgctcgactac
acggcctgctgcgcctga
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