Ruminococcus bovis: E5Z56_04660
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Entry
E5Z56_04660 CDS
T05998
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ruj
Ruminococcus bovis
Pathway
ruj00550
Peptidoglycan biosynthesis
ruj01100
Metabolic pathways
ruj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ruj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E5Z56_04660
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E5Z56_04660
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ruj01011
]
E5Z56_04660
Enzymes [BR:
ruj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E5Z56_04660
Peptidoglycan biosynthesis and degradation proteins [BR:
ruj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
E5Z56_04660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Beta-lactamase2
He_PIG
Motif
Other DBs
NCBI-ProteinID:
QCT06699
UniProt:
A0A4P8XX25
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All DBs
Position
complement(993208..995211)
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AA seq
667 aa
AA seq
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MENKLNRRGILVLVIAIVIFVGFMVRLFFWQVVDGEKYKEIAKNNSTYSLTSNRTRGEIL
TSDGKPLATNKTVYNVVLKKGYIDDNKLNDTIIKVLDLLKTRNEKWIDNLPISYKNNSYN
FKNDDNSKKNLSYLKSKEFLGYLDIDKDDSADNFIEKLADRYDCKNIKNEEEKRNVISVR
FNMEKSNFSTTNDYVLAENISNDMMQIVSENTQSMSGVEVDTEVERVYKNGTLAPHIVGT
VGKINEEEYNENKGYELNDLIGKFGIEKAFESELRGEVGKAYVEKNSKGNVIGTVETENA
KPGNTVWLTIDSGLQKVALESLEYNINQCHSLVANDCVAGGVVMLNVKDFSVLAAASFPT
YDISKYSDYDYYTSLSNDETTPLYSRTFDGAFAPGSVFKPCVALAGLEEGKITKDSVITC
TQDYDYYPTDIVKCMGYHGDTSLNKALAVSCNYYFAEVGRRLGINTIYSYAEKFGLGLPT
GVEINESTGILAGRDSKSWTAGNTVQAAIGQSDNAFTPAQLATYVATIANNGTRLQTHLM
KKITSYDRKKTIKENNESNVEVKSTLKVNEENLKAVQKGMWSVCNESDGTAYDVFSNYGV
TVAGKTGTAENSGTDHTVFMCYAPYEKPEVAIAVVVEHGSMKKYSTDVAKALLDKYFYNK
DYTPSEE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaacaaattgaaccgtagaggtatccttgtacttgtaattgcaatagttattttt
gtcggttttatggtaagacttttcttttggcaagttgtagatggtgagaagtataaagaa
attgcaaagaacaactccacatattcattgacttctaacagaacaagaggagaaattctg
acaagtgacggtaaaccacttgccacaaacaaaactgtatataatgtggtactgaaaaaa
ggttatattgatgataataagctgaatgatactattattaaggtacttgatttgttaaaa
acaagaaatgaaaagtggattgataacctacctatttcatacaaaaataacagttataat
tttaagaatgacgataacagtaagaaaaatttgtcatacctaaaaagtaaagaattttta
ggttatttggatattgataaagatgattcagccgataactttatagaaaagttagctgat
agatatgattgtaaaaatattaaaaatgaagaagaaaaaagaaatgtaatttcagttaga
tttaatatggaaaaaagtaatttctcaactactaacgactatgttttagctgaaaatatt
tctaatgatatgatgcagattgtgtcagaaaatacccagagtatgtcaggtgttgaagta
gatacagaagttgaaagagtttataagaacggtactttagcacctcatattgtaggtaca
gtcggtaaaataaatgaagaagaatataacgaaaataagggttatgaacttaatgacctt
atcggtaagtttggtatagaaaaagcctttgaaagtgaacttcgtggtgaagttggtaag
gcttatgtggaaaaaaattctaaaggtaatgttatcggtacagtagaaactgaaaatgca
aaacccggaaatactgtttggctaactattgacagtggtcttcaaaaggtagctttggag
tctttggaatataatattaatcagtgtcacagtttagttgccaatgattgtgtagccggt
ggtgttgttatgctgaatgttaaggatttttcggttttggcagcagcatcattccctact
tatgatatttctaagtatagtgactatgactactacacttcactttctaatgatgaaaca
actccactttacagcagaacctttgatggtgcatttgcacctggttcggtttttaagcct
tgtgttgctttagccggtctagaggaaggtaaaattactaaagattctgtaataacttgt
acccaagattatgactactaccctactgatattgttaaatgtatgggttatcatggtgat
acttcgcttaataaagcacttgcagtttcttgtaattattattttgcagaagtcggcaga
agattaggtataaacactatttacagttatgccgagaaatttggtttaggtctccctaca
ggtgtggaaattaatgaaagtacaggtatccttgccggaagagatagtaaaagttggact
gccggtaatactgtacaagctgctatcggtcaaagtgataatgcatttacaccggcacaa
cttgcaacttatgttgccacaattgctaataacggtaccagactgcaaactcacttaatg
aagaaaattacttcatatgacagaaaaaagaccattaaagaaaataatgaaagcaatgta
gaggttaagtcaacactaaaggtaaatgaggaaaacttaaaggcagtacaaaaaggtatg
tggagtgtttgtaacgaaagtgacggtactgcctatgatgtattcagtaattacggtgta
actgttgccggtaaaacaggtactgctgaaaacagtggtacagaccatacagtatttatg
tgttatgctccatatgaaaaacctgaggttgcaattgctgttgtagttgaacatggttca
atgaaaaaatattcaacagatgttgcaaaagcacttcttgataaatatttctataacaaa
gactatactccaagtgaagagtaa
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