Ruminococcus bovis: E5Z56_06050
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Entry
E5Z56_06050 CDS
T05998
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ruj
Ruminococcus bovis
Pathway
ruj00521
Streptomycin biosynthesis
ruj00523
Polyketide sugar unit biosynthesis
ruj00541
O-Antigen nucleotide sugar biosynthesis
ruj01100
Metabolic pathways
ruj01110
Biosynthesis of secondary metabolites
ruj01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ruj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
E5Z56_06050 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E5Z56_06050 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E5Z56_06050 (rfbC)
Enzymes [BR:
ruj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E5Z56_06050 (rfbC)
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Paralog
Gene cluster
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCT06950
UniProt:
A0A4P8XY10
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All DBs
Position
1291063..1291665
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AA seq
200 aa
AA seq
DB search
MGQIKVTKCPIEGLYIIEPAVHGDNRGYFMETYNQNDMHEAGLDMVFVQDNQSMSTKGVL
RGLHFQKQYPQGKLVRAIKGRVFDVAVDLRSGSETYGKWYGVELTEENKKQFYISEGFAH
GFLVLSDEAEFCYKVTDFYHPGDEGGLAWNDPEIGIEWPELEGNYDGTCEVGNYHLKDGT
KLNLSDKDQKWLGLKDTFKF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggacagattaaagtaacaaagtgtccaatcgaaggactatatattattgaacctgca
gtacatggtgacaaccgtggttattttatggaaacatataaccagaacgatatgcacgaa
gcaggtcttgatatggtatttgtacaagataaccaaagtatgagtacaaagggtgtacta
aggggtcttcacttccaaaagcagtacccacaaggtaaacttgtaagagctattaagggt
agagtttttgatgtggcagttgacttgcgttcaggtagcgaaacatacggtaagtggtat
ggtgttgaactaactgaagaaaataaaaagcagttctatatttcagaaggttttgctcat
ggtttcctagttcttagtgatgaagcagaattttgttacaaggttaccgacttttatcat
ccgggagatgaaggtggtcttgcttggaatgaccctgaaattggtattgaatggcctgaa
cttgaaggcaactatgacggtacttgtgaagtaggtaattatcacctaaaagacggtaca
aagctaaacctaagcgataaagaccaaaagtggttaggtttaaaggatacatttaagttt
taa
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