Ruminococcus sp. SR1/5: CK1_22750
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Entry
CK1_22750 CDS
T02601
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CK1_22750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rum03400
]
CK1_22750
Enzymes [BR:
rum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CK1_22750
DNA repair and recombination proteins [BR:
rum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CK1_22750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PriA_CRR
PriA_C
TrwB_AAD_bind
ADDB_N
zinc-ribbons_6
AAA_22
Helicase_C_2
DZR
SWI2_SNF2
zf-CHY
DUF87
AAA_16
AAA_30
RUBY_RBDX
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
CBL20256
LinkDB
All DBs
Position
complement(1963510..1965123)
Genome browser
AA seq
537 aa
AA seq
DB search
MELSLNQEQLLAAEQIFREWQEPDPRPALLFGVTGSGKTQVYMRLIQKVLEEGKQAIVLI
PEIALTYQTVRRFYAMFGDKVSVLNSRLSQGERYDQFKRAKRGEIQVMVGPRSALFTPFS
DLGLIVIDEEHEPTYKSENTPRYHARETAIERARMEHARVVMGSATPSLEAYSHACDGEY
LLVKLNARYEERPLPQVSIVDLREELKKGNRSVLSLELKRDLEQVLERREQAMLFLNRRG
YAGFVSCRACGHVMKCPHCDVSLSEHNGNRLICHYCGYETVKPEICPSCGSPHIGGFKAG
TQQIEKVIEKEFPKARVLRMDFDTTRTKDSYEKILASFAKHEADILVGTQMIVKGHDFPN
VTLVGVIAADLSLNMDDYHCGERTFQLLTQAVGRSGRGNRPGQAVIQTYQPEHYSIQAAA
IQDYKKFYKEEMGYRMLLDYPPAAHMMTVFGACQDEELLKNAMYYIEVFIRRVSPKEELH
MIGPAAASVGKVKDVYRQVIHLKHRDICFLTAVREKLEKYIEINSGFRKIYIQFDMN
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagtctgaaccaggaacagcttttggcggcagagcagatctttcgggaatgg
caggagccggacccaaggcctgcacttcttttcggagtgaccggaagcggaaagacccag
gtttatatgcgcctgatccagaaggtactggaggagggaaaacaggcgatcgtgctgatc
cctgagatcgcgcttacttatcagacagtcaggcgcttttatgccatgttcggagataag
gtttcggttctgaactccagactttcccagggagaacgttatgatcagttcaaaagagca
aaacgtggtgagatccaggtgatggtaggacccagatccgcactgttcacaccgttttca
gatctgggactgatcgttatcgacgaagagcatgaacccacctacaaaagtgagaatacg
ccaaggtaccatgcacgtgagactgccattgagagggcacgaatggaacatgcccgtgtg
gtcatgggatcagccactccgtcattggaagcctacagtcatgcctgtgacggagaatat
cttctggtaaagttaaacgcacgttatgaggaaaggcctcttccacaggtatcaatcgtg
gatcttcgggaagaattaaagaaaggaaaccgctcggtactgagtctggagctgaagagg
gatctggagcaggtccttgaaagaagagaacaggccatgctgtttctgaaccggagagga
tatgcgggctttgtttcctgcagagcctgcggtcacgttatgaaatgtccccactgtgat
gtatctctaagtgaacacaatggcaatcgtctgatctgtcattattgcggctatgagact
gtgaaaccggaaatctgtccgtcctgtggttcaccgcacattggtggatttaaggcagga
acccagcagatcgagaaggtcattgaaaaagaattcccgaaagccagggtacttcgaatg
gattttgataccacaaggaccaaggacagctatgagaagatcctggcttcttttgcaaag
catgaggcagatattctggtggggacccagatgatcgtcaagggacatgattttccgaat
gtgactctggtaggagtgattgcagcagatctttcgctgaatatggatgactatcactgc
ggggagcgtacattccagcttctgactcaggcagttggacgttccggcagagggaatcgg
ccggggcaggcggtgatccagacatatcagccggagcattacagtatccaggctgcggct
attcaggattataagaaattttataaagaagaaatggggtatcggatgcttctggactat
ccgccggcagcccatatgatgactgtttttggcgcctgccaggatgaagaacttctgaaa
aatgccatgtattatatagaagtttttatccgcagggtaagtccgaaggaagagcttcac
atgatcggacctgcagctgcatcggtaggtaaggtaaaggatgtttatcgtcaggtgatc
catctgaagcacagggatatctgctttctcacagcagtcagagagaagctggagaaatat
atagagataaattccggattccggaaaatatacattcaatttgatatgaattaa
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