Ruminococcus sp. SR1/5: CK1_25120
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Entry
CK1_25120 CDS
T02601
Name
(GenBank) carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
KO
K10119
raffinose/stachyose/melibiose transport system permease protein
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CK1_25120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rum02000
]
CK1_25120
Transporters [BR:
rum02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
CK1_25120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CBL20455
LinkDB
All DBs
Position
complement(2199688..2200530)
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AA seq
280 aa
AA seq
DB search
MIKSRKNIPIRAVFYVVILIFVMIQVYPIFWVICSSLKTPDEMTYTAQYALPSGFYLGNY
ISALTISSIPRYFLNSTVVAVLTLLGIVVLGCPVAFVISKVKVKYANALMAFFLFGMMVP
IFSCLIPMFQIYNRIGLRNTYWALVLPQIGFGLPMCIYLYTGFFKFMPDSLLEAAVIDGA
TMGTTFRKIVVPMAKNTTMTVLTYNFVFVWNEFTYANTFISSSDMKTLPIGLNDFVGQFG
RVDWGSTFAAIVISILPTLIVYFILNKNIIEGMAAGAVKS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatcaagaaaaaatatacctattcgtgctgtgttctatgtagtgatccttatt
tttgtcatgatacaggtctaccctattttctgggttatctgctccagtctgaaaacaccg
gatgaaatgacatatactgcacagtatgccctgccatcaggattttatcttggaaactat
atcagcgcactgacgatctcatccattccaagatattttcttaacagtacggttgtggca
gttctcacacttcttggcatcgtagtcctgggatgcccggttgcatttgtgatcagcaag
gtaaaggtaaaatatgccaatgcactgatggcatttttcctgtttggaatgatggtgcct
attttttcctgccttatacccatgttccagatttataacaggatcggactgagaaataca
tactgggcactggtgcttccgcagatcgggttcggacttccaatgtgtatctatctttac
accggattttttaaatttatgccggattctcttctggaagcagcagttattgacggtgcc
acaatgggaaccacattccgcaagatcgtggtacctatggctaaaaatactacaatgaca
gttcttacatacaattttgtttttgtatggaacgaatttacatatgccaatacatttatc
tcatcttctgatatgaaaactctgccaattggcctgaatgactttgtggggcagttcgga
agagtggactggggaagtacatttgcggcgatcgtaatatcgatcctgcctacactgatc
gtgtattttattcttaacaaaaacataatcgaaggtatggctgcaggtgcggtcaagagt
tag
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