Ruminococcus sp. SR1/5: CK1_26640
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Entry
CK1_26640 CDS
T02601
Name
(GenBank) Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum01503
Cationic antimicrobial peptide (CAMP) resistance
rum02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CK1_26640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
CK1_26640
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rum01002
]
CK1_26640
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rum03110
]
CK1_26640
Enzymes [BR:
rum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
CK1_26640
Peptidases and inhibitors [BR:
rum01002
]
Serine peptidases
Family S1: chymotrypsin family
CK1_26640
Chaperones and folding catalysts [BR:
rum03110
]
Other chaperones and cochaperones
DegP / HtrA
CK1_26640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_6
PDZ_2
PDZ
PDZ_1
Coleoptericin
Motif
Other DBs
NCBI-ProteinID:
CBL20582
LinkDB
All DBs
Position
complement(2338457..2339926)
Genome browser
AA seq
489 aa
AA seq
DB search
MNNNRKLKIKKMMKKGATISLCAVLAGGIGVGAYEGINYFSGAQSVQAATDSSENLTLMK
SDKKSNKDSEDTEATKSSDTKGSLDVSDVAEKAMPSVVAITTKSVQEVQDYYSMFGSQYA
PSQEQEVEGSGSGIIIGKTDSELLIATNYHVVDGADTLSVAFADGNAYEATVKGFDESED
LAVVSVATKDVSDDTMDAISVAKIGSSDDLKIGEQVVAIGNALGYGQSVTTGIVSAKNRK
TDASGQIEGDSTDNSSSINKGVNLIQTDAAINPGNSGGALLNMDGEVVGINSSKLASTEV
EGMGYAIAISDVADSLENMMNAKARDKVDNHGILGITGSTVSTEAVQIYGIPQGVFVSKV
TEGGPADDAGITKNMVITEFDGKTITSIDQLVELLQYYEPKEKIDVTVAVLDGNEYKEKT
LTVKLGKDDSSSKDSKDSSEDSVSQDSQDADIPYIQGGQDDSDQGDADAFADDGEASLFR
DFEQNGLYD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacagaaaattaaaaataaagaaaatgatgaaaaagggtgcaaccatcagc
ctgtgtgcagtacttgccggcggcattggagttggtgcatatgaaggtataaattatttc
tccggtgcacagtccgtacaggcggcaaccgatagctccgagaatctgactcttatgaag
tctgataaaaaatcaaataaagacagcgaagatacagaggctacaaaatcctccgataca
aagggcagtctggatgtatcagatgttgctgagaaggcaatgccttctgtagttgccatc
acaaccaagtccgttcaggaggttcaggattattacagcatgtttggttcccagtatgcg
ccgagccaggagcaggaagttgaaggaagcggttccggtattatcatcggaaaaacagat
tctgagctactgatcgccacaaactatcatgttgtggatggtgccgataccttgtcagtt
gcctttgcagatggtaatgcttatgaggctacggtaaagggctttgatgaaagcgaggat
cttgcagttgtttctgttgcaacgaaggatgtttcggatgatacaatggatgcaatttct
gttgcaaagatcggaagctctgatgatctgaagatcggtgagcaggttgttgccatcggt
aatgcacttggctatggccagtccgttactactggtattgtcagtgctaagaaccgtaag
acagatgcatcaggacagatcgagggtgattctacagataacagcagcagtatcaacaag
ggcgtgaacctgatccagacagatgcggctatcaatcccggtaacagtggcggtgcgctt
ctgaatatggatggtgaggttgttggtattaactcttccaagcttgcttctactgaggtt
gaaggtatggggtatgccattgcaatttctgatgttgcggattctcttgagaacatgatg
aatgccaaggcaagagataaagtggataatcatggtatccttggtatcacaggcagtaca
gtaagtacggaggcagtacagatttatggtatcccgcagggtgtatttgtttcgaaggta
accgagggcggccctgccgatgatgcaggtattaccaagaatatggtcattacagagttt
gatggtaaaacgatcaccagtatcgatcagctggttgagctgcttcagtattatgagccg
aaggaaaagatcgatgtgacggttgcagttctggatggcaatgagtataaggagaagaca
ctcactgtaaaacttggtaaagatgacagttccagcaaggatagcaaggacagttctgag
gatagcgtgtcccaggattcccaggatgcagatatcccatatatccagggaggacaggat
gactccgatcagggggatgcagatgcatttgctgatgatggagaagccagcctgtttaga
gattttgagcagaatggcttgtatgactga
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