Runella sp. SP2: DTQ70_18155
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Entry
DTQ70_18155 CDS
T05690
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rup
Runella sp. SP2
Pathway
rup03420
Nucleotide excision repair
rup03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DTQ70_18155
03430 Mismatch repair
DTQ70_18155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rup03400
]
DTQ70_18155
Enzymes [BR:
rup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DTQ70_18155
DNA repair and recombination proteins [BR:
rup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DTQ70_18155
MMR (mismatch excision repair)
Other MMR factors
DTQ70_18155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
LcrV
ResIII
Motif
Other DBs
NCBI-ProteinID:
AYQ33960
UniProt:
A0A3G3GRT1
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All DBs
Position
4555066..4557399
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AA seq
777 aa
AA seq
DB search
MIDYLSGLNEPQAQAVTHGPGPLMIIAGAGSGKTRVLTFRIAHLIENGVDPFRILSLTFT
NKAAGEMRARIEKVVGYEARNIWMGTFHAVFAKILRIEARFLGYTSDFSIYDTDDSKSLI
KSIVKELNLDDKTYKANVVFNRISGAKNNLISADDYLANPLFRADDEAAKLPEIGRLYKA
YTTRCFQANAMDFDDLLFNTNVLFRDFPEILNKYQHKFQYVMVDEFQDTNVAQYLITKKL
SAVHRNIAVVGDDAQSIYAFRGANIQNILNFERDFPEVRVVKLEQNYRSTQTIVNAANSV
IARNKAQFKKNVFTTNEEGGLIDVVKASSDNEEGRLIATAIFEEKVNKGLRNTDFAILYR
TNAQSRAFEEALRRLNIKYRIIGGLSFYQRKEIKDLLAYLRFIVNQNDEEAFKRIINLPK
RGIGDTTVAKISVSAAEHRVPIWEVVSNISRYVAGRATLPIEGFATLIKSFKILLEEGKD
AYAVASHVAKASGILRELYEDKTVEGLSRYENVQELLNAIKEFVDNPDNEDKTLSSFLQT
VSLLTTADESDDDGDTDRVTLMTIHGAKGLEFKNVYVVGLEEGLFPSQMMLEKREDLEEE
RRLFYVAITRAETKLTFSYAESRYNWGRLNMCEPSRFLFEVDQRFLMMTKGRRSGGMDDY
RNNAEPSSMNFIRQIANRTSQPQKGTSETVKSSTGVSSPKVPTPPPPTNSASTSSEPFVA
SDTSNLEEGNRVEHPKFGKGTVKKMDVNGTDRKAIIHFDTTGEKTLLLSFAKLRILR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgattgattatttaagtggcctcaacgaaccccaagcccaagccgtaacgcacggccca
gggccgttgatgattattgcgggtgcgggttcgggcaagacacgagtgctgaccttcaga
attgcccatttgatagaaaatggcgtggatccgtttcggattttgtcgctgacgtttacc
aacaaagccgcaggagagatgcgcgcgcgtatcgagaaagtggtcgggtacgaagcgcga
aacatctggatgggaacgtttcacgcggtgtttgccaaaatccttcgcatcgaagcgcgt
tttttgggctatacttccgatttctccatttatgataccgacgattctaaatcgctgatt
aagagcattgtcaaagagcttaacctcgacgacaaaacctacaaagccaacgtggttttt
aaccgtatttcgggggcaaaaaacaaccttatttcggccgatgactacttggcaaatccg
ttgttcagagccgacgacgaagcggcaaaattgcccgaaatcggccgcttgtacaaagct
tatacgacgcgctgttttcaggccaatgcgatggattttgacgatttgttgttcaatacc
aacgtgctttttcgcgattttcctgaaattttgaacaagtaccagcacaaattccaatac
gtgatggtcgatgagtttcaggataccaacgtggcacagtacctgattaccaaaaagtta
tcggcggtacatcggaacattgccgtggtaggcgacgatgcccaaagtatctatgccttc
cgtggggctaacattcagaatattctcaattttgagcgcgatttccccgaagtacgggtg
gtgaagttggagcaaaattaccgctcgacccaaaccatcgtgaatgcagccaactcggtg
attgctagaaataaagcgcagttcaaaaagaacgtgtttaccactaacgaggagggagga
ttgattgacgtggtgaaggcaagttcggacaacgaagaagggcggctgattgccaccgcg
atttttgaagaaaaagtaaacaaaggcttacgcaacaccgatttcgcgattttgtaccgt
accaatgcccaatcgcgggcgtttgaagaggccctccgccgactcaacatcaagtaccgc
atcattgggggattgtcgttttaccaacgcaaagaaatcaaagacttgttggcgtacttg
cgttttatcgtgaaccaaaacgacgaggaagcttttaagcgaattattaacttgcccaaa
cgtggcattggtgacaccactgtagccaaaatatccgtatcggcggccgagcaccgcgtg
ccaatttgggaagttgtttccaatatctctcggtacgtggcggggcgtgcgaccttgccc
attgagggttttgccactttgattaaaagtttcaaaattttgctggaagaaggcaaagat
gcctacgctgtagcttctcacgtggccaaagcctcgggaattttgcgggagttgtacgaa
gacaaaaccgtggagggcttgagccgctacgaaaacgtgcaagaattgctgaacgccatc
aaagagtttgtggataaccccgataatgaggacaaaacgttgagttcgtttttgcaaact
gtttcactgttaactaccgctgacgaaagcgacgatgatggcgacaccgaccgcgtaact
ttgatgacgattcacggcgcgaaggggcttgaatttaaaaatgtgtatgttgtggggcta
gaagaaggattattccctagccaaatgatgctcgaaaagcgcgaggatttggaagaagag
cgacggctgttttacgtggccattacccgtgccgaaaccaaactcacattttcgtacgcc
gaaagtcgctacaactggggtcgcctcaatatgtgcgaacctagccgatttttgtttgaa
gttgaccagcgttttttgatgatgaccaaagggcgccgttcgggaggcatggacgactac
cgaaacaatgcggagccgtcgtcgatgaattttattcgtcagatagccaaccgcacttct
caacctcaaaaaggaacgagcgaaacggttaaaagttcaactggggtatccagtcccaag
gtgccgactcctcccccaccaaccaacagcgccagtacgtcgagcgagccttttgtggca
agtgatacctcaaatctggaagaaggtaatcgcgtagaacacccaaaatttgggaaaggt
acggtcaagaaaatggacgtcaacggcactgaccgcaaagccattattcattttgacaca
acgggcgaaaaaaccctcttattgagttttgcgaagctgagaattttacggtag
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