Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00026
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Entry
RBI_I00026 CDS
T03158
Name
(GenBank) Glycoside Hydrolase Family 5 protein
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00500
Starch and sucrose metabolism
rus01100
Metabolic pathways
rus02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RBI_I00026
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBI_I00026
Enzymes [BR:
rus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
RBI_I00026
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Gene cluster
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Motif
Pfam:
Cellulase
fn3
CARDB
Motif
Other DBs
NCBI-ProteinID:
CCO03766
UniProt:
W0U273
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Position
I:complement(30731..32365)
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AA seq
544 aa
AA seq
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MVKLISLKKAAAVLLTSVTLMSAAAALPAVDETPLLSQTAITVEAASVGKVTGLTSKTLS
NSEIKLSWKKVSGASGYSVCMRKNGKYPQIADVKSGSTLTYTVKNLPNATRENFKVRAYK
TVKGKKVYGAYSDNWNTATNPQPAKGLKVSSVSYDSVKLSWTKIGCTNYRVFQLKNGQWK
EIAKTTGTSYTVKNLSQKTTYKFKIRACKTDDKKANHYGKYSAEVSATTSKAPAVVTPVS
QHGQLSVKGANIVDKNGKVFKIKGMSTHGIMWEDFSDILTKDSLKVLRDDWKVNTIRIAM
YTEEWGGYCTENGKYQAQAKQKVKTGVENAKSLGMYAIIDWHVLSDQNPNNHKNDAIKFF
TEMAKTYKDYNNVIYEICNEPNGGVTWTGGIKSYCQSVVSTIRKYDSDAIIICGTGTWSQ
DIDQVLGNKLSDKNCVYALHFYANTHTDWLRNRLQNCYKKGLPVLVSEFGTCDASGNGGY
NSTESTKWLKLLDSLKVGYINWSACGKSETASAFNSGTNLKAIKSGTSQLTASGKFIRDW
YRNH
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaattaatcagcctgaagaaagccgccgctgtgctgctgacttcggtaacactc
atgtcggctgcggcggcactgcctgctgtggacgaaacgccgcttctttcgcagacggcg
ataactgttgaggcggcaagcgtcggaaaagtcacagggcttacttcaaaaacacttagc
aacagcgagataaagcttagctggaaaaaggtcagcggagcttcgggatactcagtttgt
atgagaaaaaacggtaaatatccgcagatcgcagacgtaaaaagtggctcgaccctcaca
tacactgtgaaaaatctgccaaatgctacccgtgaaaacttcaaggtaagagcctacaag
accgtgaaaggaaaaaaggtatacggtgcatattccgacaactggaacaccgccacgaac
ccacagcctgcaaagggtcttaaagtatcaagcgtttcctatgacagcgtaaagctttca
tggacaaaaataggatgcacaaattacagagtatttcagcttaaaaatggtcagtggaaa
gagatcgcgaagaccacaggcacaagctacactgtaaaaaatctcagccaaaagaccaca
tacaagttcaagataagagcctgcaagacagacgacaagaaagccaaccactacggaaaa
tattctgcagaggtatcggctaccacatctaaagctcctgctgttgtgaccccagtttca
cagcatggtcagctttctgtaaagggtgcaaatattgttgacaagaacggcaaggtattc
aagataaagggtatgtcaactcacggcatcatgtgggaagatttctccgatatccttaca
aaggactctcttaaagtgctgagagatgactggaaggtcaacactataagaattgcaatg
tacacagaagaatggggtggctactgcaccgagaacggcaagtatcaggcacaggcaaag
cagaaagtcaagacaggcgttgagaacgcaaagtctcttggaatgtatgctataatcgac
tggcacgttctcagtgaccaaaaccctaacaaccacaaaaatgacgctatcaagttcttc
acagaaatggctaagacctacaaggactacaataacgttatttacgagatctgcaacgag
cctaacggcggtgtaacatggacaggcggcataaaaagttactgccagagcgttgtaagc
actatcagaaaatacgacagtgacgctatcataatttgcggtacaggcacatggagtcag
gacatagatcaggtgcttggcaacaagctttcagacaaaaactgcgtttatgctcttcac
ttctatgcaaacactcacactgattggctgagaaacagacttcagaactgctacaaaaag
ggacttcctgttcttgtatctgagttcggaacttgcgacgcaagcggaaacggcggatat
aactcaacagaaagcacaaaatggctcaagcttctcgactcactaaaagtaggctacata
aactggtcagcctgtggaaagagcgaaacggcttccgcattcaatagcggtacgaacctc
aaagctataaagagcggcacttcacagctcacagcaagcggcaagttcattcgtgattgg
tacagaaaccactga
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